Literature DB >> 27349089

Defining the scale of habitat availability for models of habitat selection.

Robert Stephen Paton, Jason Matthiopoulos.   

Abstract

Statistical models of habitat preference and species distribution (e.g., Resource Selection Functions and Maximum Entropy approaches) perform a quantitative comparison of the use of space with the availability of all habitats in an animal's environment. However, not all of space is accessible all of the time to all individuals, so availability is in fact determined by limitations in animal perception and mobility. Therefore, measuring habitat availability at biologically relevant scales is essential for understanding preference, but herein lies a trade-off: Models fitted at large spatial scales, will tend to average across the responses of different individuals that happen to be in regions with contrasting habitat compositions. We suggest that such models may fail to capture local extremes (hotspots and coldspots) in animal usage and call this potential problem, homogenization. In contrast, models fitted at smaller scales will vary stochastically depending on the particular habitat composition of their narrow spatial neighborhood, and hence fail to describe responses when predicting for different sampling instances. This is the now well-documented issue of non-transferability of habitat models. We illustrate this tradeoff, using a range of simulated experiments, incorporating variations in environmental gradients, richness and fragmentation. We propose diagnostics for detecting the two issues of homogenization and non-transferability and show that these scale-related symptoms are likely to be more pronounced in highly fragmented or steeply graded landscapes. Further, we address these problems by treating the neighborhood of each cell in the landscape grid as an individual sampling instance (with its own neighborhood), hence allowing coefficients to respond to the local expectations of environmental variables according to a Generalized Functional Response (GFR). Under simulation this approach is consistently better at estimating robust (i.e., transferable) habitat models at smaller scales, and less susceptible to homogenization at larger scales. At the same time, it represents the first application of a GFR to continuous space (rather than multiple, spatially distinct datasets), allowing the predictive advantages of this extension of species distribution models to become available to data from large-scale but single-site field studies.

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Year:  2016        PMID: 27349089     DOI: 10.1890/14-2241.1

Source DB:  PubMed          Journal:  Ecology        ISSN: 0012-9658            Impact factor:   5.499


  9 in total

1.  Predicting population change from models based on habitat availability and utilization.

Authors:  Jason Matthiopoulos; Christopher Field; Ross MacLeod
Journal:  Proc Biol Sci       Date:  2019-04-24       Impact factor: 5.349

2.  Comparative Assessment of Environmental Flow Estimation Methods in a Mediterranean Mountain River.

Authors:  Christina Papadaki; Konstantinos Soulis; Lazaros Ntoanidis; Stamatis Zogaris; Nicholas Dercas; Elias Dimitriou
Journal:  Environ Manage       Date:  2017-05-06       Impact factor: 3.266

Review 3.  Conceptual and methodological advances in habitat-selection modeling: guidelines for ecology and evolution.

Authors:  Joseph M Northrup; Eric Vander Wal; Maegwin Bonar; John Fieberg; Michel P Laforge; Martin Leclerc; Christina M Prokopenko; Brian D Gerber
Journal:  Ecol Appl       Date:  2021-11-28       Impact factor: 6.105

4.  Relative Selection Strength: Quantifying effect size in habitat- and step-selection inference.

Authors:  Tal Avgar; Subhash R Lele; Jonah L Keim; Mark S Boyce
Journal:  Ecol Evol       Date:  2017-06-14       Impact factor: 2.912

5.  Important At-Sea Areas of Colonial Breeding Marine Predators on the Southern Patagonian Shelf.

Authors:  Alastair M M Baylis; Megan Tierney; Rachael A Orben; Victoria Warwick-Evans; Ewan Wakefield; W James Grecian; Phil Trathan; Ryan Reisinger; Norman Ratcliffe; John Croxall; Letizia Campioni; Paulo Catry; Sarah Crofts; P Dee Boersma; Filippo Galimberti; José P Granadeiro; Jonathan Handley; Sean Hayes; April Hedd; Juan F Masello; William A Montevecchi; Klemens Pütz; Petra Quillfeldt; Ginger A Rebstock; Simona Sanvito; Iain J Staniland; Paul Brickle
Journal:  Sci Rep       Date:  2019-06-11       Impact factor: 4.379

6.  Great egret (Ardea alba) habitat selection and foraging behavior in a temperate estuary: Comparing natural wetlands to areas with shellfish aquaculture.

Authors:  Scott Jennings; David Lumpkin; Nils Warnock; T Emiko Condeso; John P Kelly
Journal:  PLoS One       Date:  2021-12-31       Impact factor: 3.240

7.  Fine-scale foraging habitat selection by two diving central place foragers in the Northeast Atlantic.

Authors:  Mathilde Huon; Yann Planque; Mark John Jessopp; Michelle Cronin; Florence Caurant; Cécile Vincent
Journal:  Ecol Evol       Date:  2021-08-24       Impact factor: 3.167

8.  Distribution model transferability for a wide-ranging species, the Gray Wolf.

Authors:  M G Gantchoff; D E Beyer; J D Erb; D M MacFarland; D C Norton; B J Roell; J L Price Tack; J L Belant
Journal:  Sci Rep       Date:  2022-08-08       Impact factor: 4.996

9.  Wildfire and the ecological niche: Diminishing habitat suitability for an indicator species within semi-arid ecosystems.

Authors:  Shawn T O'Neil; Peter S Coates; Brianne E Brussee; Mark A Ricca; Shawn P Espinosa; Scott C Gardner; David J Delehanty
Journal:  Glob Chang Biol       Date:  2020-09-09       Impact factor: 13.211

  9 in total

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