Literature DB >> 27334505

Cloning, molecular characterization, and expression analysis of the unc45 myosin chaperone b(unc45b)gene of grass carp (Ctenopharyngodon idellus).

Jing Hu1, Ting Guo1, Wen-Qian Pan1, Tian Gan1, Jing Wei1, Jun-Peng Wang1, Xiang-Jun Leng2, Xiao-Qin Li3,4,5,6.   

Abstract

Unc45 myosin chaperone b(unc45b)gene is a molecular chaperone that mediates the folding, assembly and accumulation of thick-filament myosin in the formation of sarcomere, which plays an important role in the development of striated muscle and the stability of sarcomere. In this study, the complete cDNA sequence of unc45b gene of grass carp was obtained by rapid amplification of cDNA ends (RACE), and the characteristics of the unc45b protein predicted from gene sequence was analyzed by bioinformatics methods. The differential expression pattern in tissues was also detected by quantitative real-time PCR. The results showed that the full-length of unc45b gene of grass carp is 3163 bp, which contains a 60 bp 5'UTR, a 298 bp 3'UTR, and a 2865 bp open reading frame (ORF) encoding a 934 amino acid peptide. The deduced unc45b protein exhibits a homology of 92, 86, 86 % with the protein of zebrafish (Danio rerio), channel catfish (Ietalurus punctatus) and tilapia (Oreochromis niloticus) respectively, and the protein contains UCS myosin head binding domain and TPR peptide repeat domain. The protein is a hydrophilic and non-secretory protein with a molecular mass and isoeletronic point of 103,699.8 and 7.39 Da. The structural elements of the protein includes α-helixes and loops, and the unc45b gene highly expresses in skeletal muscle and heart in grass carp. This study laid a foundation for further research in explaining the myofibril accumulation in crisped grass carp.

Entities:  

Keywords:  Bioinformatics analysis; Grass carp; RACE; Tissues differential expression; unc45b gene

Mesh:

Substances:

Year:  2016        PMID: 27334505     DOI: 10.1007/s10974-016-9445-5

Source DB:  PubMed          Journal:  J Muscle Res Cell Motil        ISSN: 0142-4319            Impact factor:   2.698


  31 in total

1.  Role of the myosin assembly protein UNC-45 as a molecular chaperone for myosin.

Authors:  Jose M Barral; Alex H Hutagalung; Achim Brinker; F Ulrich Hartl; Henry F Epstein
Journal:  Science       Date:  2002-01-25       Impact factor: 47.728

2.  Improved prediction of signal peptides: SignalP 3.0.

Authors:  Jannick Dyrløv Bendtsen; Henrik Nielsen; Gunnar von Heijne; Søren Brunak
Journal:  J Mol Biol       Date:  2004-07-16       Impact factor: 5.469

3.  UNC-45/CRO1/She4p (UCS) protein forms elongated dimer and joins two myosin heads near their actin binding region.

Authors:  Hang Shi; Günter Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-29       Impact factor: 11.205

Review 4.  The UNC-45 myosin chaperone: from worms to flies to vertebrates.

Authors:  Chi F Lee; Girish C Melkani; Sanford I Bernstein
Journal:  Int Rev Cell Mol Biol       Date:  2014       Impact factor: 6.813

5.  X-ray crystal structure of the UCS domain-containing UNC-45 myosin chaperone from Drosophila melanogaster.

Authors:  Chi F Lee; Arthur V Hauenstein; Jonathan K Fleming; William C Gasper; Valerie Engelke; Banumathi Sankaran; Sanford I Bernstein; Tom Huxford
Journal:  Structure       Date:  2011-03-09       Impact factor: 5.006

6.  Regulation of the myosin-directed chaperone UNC-45 by a novel E3/E4-multiubiquitylation complex in C. elegans.

Authors:  Thorsten Hoppe; Giuseppe Cassata; José M Barral; Wolfdieter Springer; Alex H Hutagalung; Henry F Epstein; Ralf Baumeister
Journal:  Cell       Date:  2004-08-06       Impact factor: 41.582

7.  The Pfam protein families database.

Authors:  Robert D Finn; Jaina Mistry; John Tate; Penny Coggill; Andreas Heger; Joanne E Pollington; O Luke Gavin; Prasad Gunasekaran; Goran Ceric; Kristoffer Forslund; Liisa Holm; Erik L L Sonnhammer; Sean R Eddy; Alex Bateman
Journal:  Nucleic Acids Res       Date:  2009-11-17       Impact factor: 16.971

8.  The UCS factor Steif/Unc-45b interacts with the heat shock protein Hsp90a during myofibrillogenesis.

Authors:  Christelle Etard; Martine Behra; Nadine Fischer; David Hutcheson; Robert Geisler; Uwe Strähle
Journal:  Dev Biol       Date:  2007-05-18       Impact factor: 3.582

9.  Knockdown and overexpression of Unc-45b result in defective myofibril organization in skeletal muscles of zebrafish embryos.

Authors:  Elena P Bernick; Pei-Jun Zhang; Shaojun Du
Journal:  BMC Cell Biol       Date:  2010-09-17       Impact factor: 4.241

10.  SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information.

Authors:  Marco Biasini; Stefan Bienert; Andrew Waterhouse; Konstantin Arnold; Gabriel Studer; Tobias Schmidt; Florian Kiefer; Tiziano Gallo Cassarino; Martino Bertoni; Lorenza Bordoli; Torsten Schwede
Journal:  Nucleic Acids Res       Date:  2014-04-29       Impact factor: 16.971

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  1 in total

1.  Impact of Lactobacillus casei BL23 on the Host Transcriptome, Growth and Disease Resistance in Larval Zebrafish.

Authors:  Chubin Qin; Yadong Xie; Yibing Wang; Shuning Li; Chao Ran; Suxu He; Zhigang Zhou
Journal:  Front Physiol       Date:  2018-09-04       Impact factor: 4.566

  1 in total

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