Literature DB >> 2732699

The complete nucleotide sequence of plum pox virus RNA.

E Maiss1, U Timpe, A Brisske, W Jelkmann, R Casper, G Himmler, D Mattanovich, H W Katinger.   

Abstract

The complete nucleotide sequence of the RNA of an aphid non-transmissible plum pox virus (PPV-NAT) isolate has been determined from five overlapping cDNA clones. cDNA prepared by primer extension was used to determine the 5' terminus. The assembled RNA is 9741 nucleotides in length, excluding a 3' terminal poly(A) sequence. One large open reading frame starts at nucleotide positions 36 to 38 and is terminated with an UAG codon at positions 9522 to 9524. The putative start codon is located at positions 147 to 149. The encoded polyprotein has a predicted Mr of 353.8K. Comparison of cistrons from tobacco vein mottling virus and tobacco etch virus with those predicted for PPV-NAT indicated a similar genome organization. A highly conserved sequence of 12 nucleotides was found in the 5' non-coding region of these three potyviruses. The potential polyadenylation signal from yeast (UAUGU) was found in the 3' non-coding region of PPV-NAT and several other members of the potyvirus group.

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Year:  1989        PMID： 2732699     DOI： 10.1099/0022-1317-70-3-513

Source DB:  PubMed          Journal:  J Gen Virol        ISSN： 0022-1317            Impact factor:   3.891


  36 in total

1.  Relationships among the positive strand and double-strand RNA viruses as viewed through their RNA-dependent RNA polymerases.

Authors:  J A Bruenn
Journal:  Nucleic Acids Res       Date:  1991-01-25       Impact factor: 16.971

Review 2.  Cap-independent translation of plant viral RNAs.

Authors:  Elizabeth L Pettit Kneller; Aurélie M Rakotondrafara; W Allen Miller
Journal:  Virus Res       Date:  2005-12-19       Impact factor: 3.303

3.  Nucleotide sequence of the coat protein gene of a strain of clover yellow vein virus from New Zealand: conservation of a stem-loop structure in the 3' region of potyviruses.

Authors:  G T Bryan; R C Gardner; R L Forster
Journal:  Arch Virol       Date:  1992       Impact factor: 2.574

4.  Evolutionary relationship between luteoviruses and other RNA plant viruses based on sequence motifs in their putative RNA polymerases and nucleic acid helicases.

Authors:  N Habili; R H Symons
Journal:  Nucleic Acids Res       Date:  1989-12-11       Impact factor: 16.971

5.  Cap-independent enhancement of translation by a plant potyvirus 5' nontranslated region.

Authors:  J C Carrington; D D Freed
Journal:  J Virol       Date:  1990-04       Impact factor: 5.103

6.  The complete nucleotide sequence of turnip mosaic virus RNA Japanese strain.

Authors:  K Ohshima; M Tanaka; N Sako
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

Review 7.  Identification and classification of potyviruses on the basis of coat protein sequence data and serology. Brief review.

Authors:  D D Shukla; C W Ward
Journal:  Arch Virol       Date:  1989       Impact factor: 2.574

8.  Coat protein mediated resistance to Plum Pox Virus in Nicotiana clevelandii and N. benthamiana.

Authors:  F Regner; A da Câmara Machado; M L da Câmara Machado; H Steinkellner; D Mattanovich; V Hanzer; H Weiss; H Katinger
Journal:  Plant Cell Rep       Date:  1992-02       Impact factor: 4.570

9.  Nucleotide sequences of the helper component-proteinase genes of aphid transmissible and non-transmissible isolates of turnip mosaic virus.

Authors:  H Nakashima; N Sako; K Hori
Journal:  Arch Virol       Date:  1993       Impact factor: 2.574

10.  On the variability of the 3' terminal sequence of the turnip mosaic virus genome.

Authors:  Y Sano; R van der Vlugt; P de Haan; A Takahashi; M Kawakami; R Goldbach; M Kojima
Journal:  Arch Virol       Date:  1992       Impact factor: 2.574
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