Literature DB >> 2730871

Heteronuclear three-dimensional NMR spectroscopy of the inflammatory protein C5a.

E R Zuiderweg1, S W Fesik.   

Abstract

The utility of three-dimensional heteronuclear NMR spectroscopy for the assignment of 1H and 15N resonances of the inflammatory protein C5a (MW 8500), uniformly labeled with 15N, is demonstrated at a protein concentration of 0.7 mM. It is shown that dramatic simplification of the 2D nuclear Overhauser effect spectrum (NOESY) is obtained by editing with respect to the frequency of the 15N heteronucleus in a third dimension. The improved resolution in the 3D experiment largely facilitates the assignment of protein NMR spectra and allows for the determination of distance constraints from otherwise overlapping NOE cross peaks for purposes of 3D structure determination. The results show that 15N heteronuclear 3D NMR can facilitate the structure determination of small proteins and promises to be a useful tool for the study of larger systems that cannot be studied by conventional 2D NMR techniques.

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Year:  1989        PMID: 2730871     DOI: 10.1021/bi00432a008

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  75 in total

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Authors:  T Kernebeck; S Pflanz; G Müller-Newen; G Kurapkat; R M Scheek; K Dijkstra; P C Heinrich; A Wollmer; S Grzesiek; J Grötzinger
Journal:  Protein Sci       Date:  1999-01       Impact factor: 6.725

2.  An examination of coaxial stacking of helical stems in a pseudoknot motif: the gene 32 messenger RNA pseudoknot of bacteriophage T2.

Authors:  J A Holland; M R Hansen; Z Du; D W Hoffman
Journal:  RNA       Date:  1999-02       Impact factor: 4.942

3.  Binding of the MLL PHD3 finger to histone H3K4me3 is required for MLL-dependent gene transcription.

Authors:  Pei-Yun Chang; Robert A Hom; Catherine A Musselman; Li Zhu; Alex Kuo; Or Gozani; Tatiana G Kutateladze; Michael L Cleary
Journal:  J Mol Biol       Date:  2010-05-07       Impact factor: 5.469

4.  NMR structure determination of the hypothetical protein TM1290 from Thermotoga maritima using automated NOESY analysis.

Authors:  Touraj Etezady-Esfarjani; Torsten Herrmann; Wolfgang Peti; Heath E Klock; Scott A Lesley; Kurt Wüthrich
Journal:  J Biomol NMR       Date:  2004-07       Impact factor: 2.835

5.  Topology and dynamics of the 10 kDa C-terminal domain of DnaK in solution.

Authors:  E B Bertelsen; H Zhou; D F Lowry; G C Flynn; F W Dahlquist
Journal:  Protein Sci       Date:  1999-02       Impact factor: 6.725

6.  Nuclear Magnetic Resonance Insight into the Multiple Glycosaminoglycan Binding Modes of the Link Module from Human TSG-6.

Authors:  Younghee Park; Thomas A Jowitt; Anthony J Day; James H Prestegard
Journal:  Biochemistry       Date:  2016-01-06       Impact factor: 3.162

7.  1H(C) and 1H(N) total NOE correlations in a single 3D NMR experiment. 15N and 13C time-sharing in t1 and t2 dimensions for simultaneous data acquisition.

Authors:  Youlin Xia; Adelinda Yee; Cheryl H Arrowsmith; Xiaolian Gao
Journal:  J Biomol NMR       Date:  2003-11       Impact factor: 2.835

8.  NMR detection of slow conformational dynamics in an endonuclease toxin.

Authors:  S B Whittaker; R Boetzel; C MacDonald; L Y Lian; A J Pommer; A Reilly; R James; C Kleanthous; G R Moore
Journal:  J Biomol NMR       Date:  1998-07       Impact factor: 2.835

9.  Refocusing revisited: an optimized, gradient-enhanced refocused HSQC and its applications in 2D and 3D NMR and in deuterium exchange experiments.

Authors:  J H Davis
Journal:  J Biomol NMR       Date:  1995-06       Impact factor: 2.835

10.  Statistical analysis of double NOE transfer pathways in proteins as measured in 3D NOE-NOE spectroscopy.

Authors:  G W Vuister; R Boelens; A Padilla; R Kaptein
Journal:  J Biomol NMR       Date:  1991-11       Impact factor: 2.835

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