Literature DB >> 27303902

Plant-specific DUF1110 protein from Oryza sativa: expression, purification and crystallization.

Kenichi Harada1, Eiki Yamashita1, Kento Inoue2, Koji Yamaguchi2, Toshimichi Fujiwara1, Atsushi Nakagawa1, Tsutomu Kawasaki2, Chojiro Kojima1.   

Abstract

The Os01T0156300 protein from Oryza sativa has been classified into the domain of unknown function (DUF) family DUF1110. DUF1110 family members exist in monocotyledons but not in dicotyledons, and share no sequence identity with proteins for which structures have been reported. In this study, the Os01T0156300 protein was crystallized using the hanging-drop vapour-diffusion method. X-ray diffraction data were collected to 1.84 Å resolution. The crystal belonged to space group P21, with unit-cell parameters a = 89.9, b = 89.8, c = 107.1 Å, β = 106.6°. The asymmetric unit was estimated to contain 6-11 molecules.

Entities:  

Keywords:  DUF1110; Oryza sativa; Os01T0156300; PAMP-triggered immunity; interactor for OsPUB44; plant-specific protein

Mesh:

Substances:

Year:  2016        PMID: 27303902      PMCID: PMC4909249          DOI: 10.1107/S2053230X16007573

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  10 in total

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Authors:  Kokoro Hayashi; Chojiro Kojima
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Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
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Authors:  Robert D Finn; Alex Bateman; Jody Clements; Penelope Coggill; Ruth Y Eberhardt; Sean R Eddy; Andreas Heger; Kirstie Hetherington; Liisa Holm; Jaina Mistry; Erik L L Sonnhammer; John Tate; Marco Punta
Journal:  Nucleic Acids Res       Date:  2013-11-27       Impact factor: 16.971

  10 in total
  2 in total

1.  Cooperative regulation of PBI1 and MAPKs controls WRKY45 transcription factor in rice immunity.

Authors:  Kota Ichimaru; Koji Yamaguchi; Kenichi Harada; Yusaku Nishio; Momoka Hori; Kazuya Ishikawa; Haruhiko Inoue; Shusuke Shigeta; Kento Inoue; Keita Shimada; Satomi Yoshimura; Takumi Takeda; Eiki Yamashita; Toshimichi Fujiwara; Atsushi Nakagawa; Chojiro Kojima; Tsutomu Kawasaki
Journal:  Nat Commun       Date:  2022-05-16       Impact factor: 17.694

2.  Characterization and Functional Divergence of a Novel DUF668 Gene Family in Rice Based on Comprehensive Expression Patterns.

Authors:  Hua Zhong; Hongyu Zhang; Rong Guo; Qiang Wang; Xiaoping Huang; Jianglin Liao; Yangsheng Li; Yingjin Huang; Zhaohai Wang
Journal:  Genes (Basel)       Date:  2019-11-28       Impact factor: 4.096

  2 in total

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