Literature DB >> 27296482

Dimensions of biodiversity in the Earth mycobiome.

Kabir G Peay1, Peter G Kennedy2,3, Jennifer M Talbot4.   

Abstract

Fungi represent a large proportion of the genetic diversity on Earth and fungal activity influences the structure of plant and animal communities, as well as rates of ecosystem processes. Large-scale DNA-sequencing datasets are beginning to reveal the dimensions of fungal biodiversity, which seem to be fundamentally different to bacteria, plants and animals. In this Review, we describe the patterns of fungal biodiversity that have been revealed by molecular-based studies. Furthermore, we consider the evidence that supports the roles of different candidate drivers of fungal diversity at a range of spatial scales, as well as the role of dispersal limitation in maintaining regional endemism and influencing local community assembly. Finally, we discuss the ecological mechanisms that are likely to be responsible for the high heterogeneity that is observed in fungal communities at local scales.

Mesh:

Year:  2016        PMID: 27296482     DOI: 10.1038/nrmicro.2016.59

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  95 in total

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Authors:  Thomas A Richards; Meredith D M Jones; Guy Leonard; David Bass
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Authors:  Keith Clay; Jenny Holah; Jennifer A Rudgers
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-22       Impact factor: 11.205

Review 3.  Beyond biogeographic patterns: processes shaping the microbial landscape.

Authors:  China A Hanson; Jed A Fuhrman; M Claire Horner-Devine; Jennifer B H Martiny
Journal:  Nat Rev Microbiol       Date:  2012-05-14       Impact factor: 60.633

4.  Bacterial farming by the fungus Morchella crassipes.

Authors:  Martin Pion; Jorge E Spangenberg; Anaele Simon; Saskia Bindschedler; Coralie Flury; Auriel Chatelain; Redouan Bshary; Daniel Job; Pilar Junier
Journal:  Proc Biol Sci       Date:  2013-10-30       Impact factor: 5.349

5.  The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi.

Authors:  Daniel C Eastwood; Dimitrios Floudas; Manfred Binder; Andrzej Majcherczyk; Patrick Schneider; Andrea Aerts; Fred O Asiegbu; Scott E Baker; Kerrie Barry; Mika Bendiksby; Melanie Blumentritt; Pedro M Coutinho; Dan Cullen; Ronald P de Vries; Allen Gathman; Barry Goodell; Bernard Henrissat; Katarina Ihrmark; Hävard Kauserud; Annegret Kohler; Kurt LaButti; Alla Lapidus; José L Lavin; Yong-Hwan Lee; Erika Lindquist; Walt Lilly; Susan Lucas; Emmanuelle Morin; Claude Murat; José A Oguiza; Jongsun Park; Antonio G Pisabarro; Robert Riley; Anna Rosling; Asaf Salamov; Olaf Schmidt; Jeremy Schmutz; Inger Skrede; Jan Stenlid; Ad Wiebenga; Xinfeng Xie; Ursula Kües; David S Hibbett; Dirk Hoffmeister; Nils Högberg; Francis Martin; Igor V Grigoriev; Sarah C Watkinson
Journal:  Science       Date:  2011-07-14       Impact factor: 47.728

6.  Soil fungal communities of grasslands are environmentally structured at a regional scale in the Alps.

Authors:  L Pellissier; H Niculita-Hirzel; A Dubuis; M Pagni; N Guex; C Ndiribe; N Salamin; I Xenarios; J Goudet; I R Sanders; A Guisan
Journal:  Mol Ecol       Date:  2014-08-01       Impact factor: 6.185

7.  Inhospitable sweetness: nectar filtering of pollinator-borne inocula leads to impoverished, phylogenetically clustered yeast communities.

Authors:  Carlos M Herrera; Azucena Canto; María I Pozo; Pilar Bazaga
Journal:  Proc Biol Sci       Date:  2009-11-04       Impact factor: 5.349

8.  Pathogens and insect herbivores drive rainforest plant diversity and composition.

Authors:  Robert Bagchi; Rachel E Gallery; Sofia Gripenberg; Sarah J Gurr; Lakshmi Narayan; Claire E Addis; Robert P Freckleton; Owen T Lewis
Journal:  Nature       Date:  2014-01-22       Impact factor: 49.962

9.  The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown-rot mechanism involving Fenton chemistry.

Authors:  Francois Rineau; Doris Roth; Firoz Shah; Mark Smits; Tomas Johansson; Björn Canbäck; Peter Bjarke Olsen; Per Persson; Morten Nedergaard Grell; Erika Lindquist; Igor V Grigoriev; Lene Lange; Anders Tunlid
Journal:  Environ Microbiol       Date:  2012-03-30       Impact factor: 5.491

Review 10.  From dandruff to deep-sea vents: Malassezia-like fungi are ecologically hyper-diverse.

Authors:  Anthony Amend
Journal:  PLoS Pathog       Date:  2014-08-21       Impact factor: 6.823

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  101 in total

1.  Geographic Distance and Habitat Type Influence Fungal Communities in the Arctic and Antarctic Sites.

Authors:  Tao Zhang; Neng-Fei Wang; Li-Yan Yu
Journal:  Microb Ecol       Date:  2021-06-03       Impact factor: 4.552

Review 2.  DNA barcoding of phytopathogens for disease diagnostics and bio-surveillance.

Authors:  Prassan Choudhary; Bansh Narayan Singh; Hillol Chakdar; Anil Kumar Saxena
Journal:  World J Microbiol Biotechnol       Date:  2021-02-19       Impact factor: 3.312

3.  Merging Fungal and Bacterial Community Profiles via an Internal Control.

Authors:  Miriam I Hutchinson; Tisza A S Bell; La Verne Gallegos-Graves; John Dunbar; Michaeline Albright
Journal:  Microb Ecol       Date:  2021-01-07       Impact factor: 4.552

4.  The mycobiota of the human body: a spark can start a prairie fire.

Authors:  Di Zhang; Ying Wang; Sunan Shen; Yayi Hou; Yugen Chen; Tingting Wang
Journal:  Gut Microbes       Date:  2020-03-09

5.  Scale-Dependent Influences of Distance and Vegetation on the Composition of Aboveground and Belowground Tropical Fungal Communities.

Authors:  André Boraks; Gregory M Plunkett; Thomas Morris Doro; Frazer Alo; Chanel Sam; Marika Tuiwawa; Tamara Ticktin; Anthony S Amend
Journal:  Microb Ecol       Date:  2020-10-06       Impact factor: 4.552

Review 6.  Stochastic Community Assembly: Does It Matter in Microbial Ecology?

Authors:  Jizhong Zhou; Daliang Ning
Journal:  Microbiol Mol Biol Rev       Date:  2017-10-11       Impact factor: 11.056

7.  Flooding Duration Affects the Structure of Terrestrial and Aquatic Microbial Eukaryotic Communities.

Authors:  Oliver Röhl; Nadine Graupner; Derek Peršoh; Martin Kemler; Moritz Mittelbach; Jens Boenigk; Dominik Begerow
Journal:  Microb Ecol       Date:  2017-10-12       Impact factor: 4.552

8.  Word-wide meta-analysis of Quercus forests ectomycorrhizal fungal diversity reveals southwestern Mexico as a hotspot.

Authors:  Olimpia Mariana García-Guzmán; Roberto Garibay-Orijel; Edith Hernández; Elsa Arellano-Torres; Ken Oyama
Journal:  Mycorrhiza       Date:  2017-08-17       Impact factor: 3.387

9.  Spatial Patterns of Soil Fungal Communities Are Driven by Dissolved Organic Matter (DOM) Quality in Semi-Arid Regions.

Authors:  Muke Huang; Liwei Chai; Dalin Jiang; Mengjun Zhang; Weiqian Jia; Yi Huang
Journal:  Microb Ecol       Date:  2020-04-22       Impact factor: 4.552

10.  Location, Root Proximity, and Glyphosate-Use History Modulate the Effects of Glyphosate on Fungal Community Networks of Wheat.

Authors:  Daniel C Schlatter; Chuntao Yin; Ian Burke; Scot Hulbert; Timothy Paulitz
Journal:  Microb Ecol       Date:  2017-12-07       Impact factor: 4.552

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