Literature DB >> 27295656

MIND Demons: Symmetric Diffeomorphic Deformable Registration of MR and CT for Image-Guided Spine Surgery.

Sureerat Reaungamornrat, Tharindu De Silva, Ali Uneri, Sebastian Vogt, Gerhard Kleinszig, Akhil J Khanna, Jean-Paul Wolinsky, Jerry L Prince, Jeffrey H Siewerdsen.   

Abstract

Intraoperative localization of target anatomy and critical structures defined in preoperative MR/CT images can be achieved through the use of multimodality deformable registration. We propose a symmetric diffeomorphic deformable registration algorithm incorporating a modality-independent neighborhood descriptor (MIND) and a robust Huber metric for MR-to-CT registration. The method, called MIND Demons, finds a deformation field between two images by optimizing an energy functional that incorporates both the forward and inverse deformations, smoothness on the integrated velocity fields, a modality-insensitive similarity function suitable to multimodality images, and smoothness on the diffeomorphisms themselves. Direct optimization without relying on the exponential map and stationary velocity field approximation used in conventional diffeomorphic Demons is carried out using a Gauss-Newton method for fast convergence. Registration performance and sensitivity to registration parameters were analyzed in simulation, phantom experiments, and clinical studies emulating application in image-guided spine surgery, and results were compared to mutual information (MI) free-form deformation (FFD), local MI (LMI) FFD, normalized MI (NMI) Demons, and MIND with a diffusion-based registration method (MIND-elastic). The method yielded sub-voxel invertibility (0.008 mm) and nonzero-positive Jacobian determinants. It also showed improved registration accuracy in comparison to the reference methods, with mean target registration error (TRE) of 1.7 mm compared to 11.3, 3.1, 5.6, and 2.4 mm for MI FFD, LMI FFD, NMI Demons, and MIND-elastic methods, respectively. Validation in clinical studies demonstrated realistic deformations with sub-voxel TRE in cases of cervical, thoracic, and lumbar spine.

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Year:  2016        PMID: 27295656      PMCID: PMC5097014          DOI: 10.1109/TMI.2016.2576360

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  39 in total

1.  Diffeomorphic demons: efficient non-parametric image registration.

Authors:  Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

2.  Automatic segmentation of the prostate in 3D MR images by atlas matching using localized mutual information.

Authors:  Stefan Klein; Uulke A van der Heide; Irene M Lips; Marco van Vulpen; Marius Staring; Josien P W Pluim
Journal:  Med Phys       Date:  2008-04       Impact factor: 4.071

3.  Image matching as a diffusion process: an analogy with Maxwell's demons.

Authors:  J P Thirion
Journal:  Med Image Anal       Date:  1998-09       Impact factor: 8.545

4.  Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge.

Authors:  Keelin Murphy; Bram van Ginneken; Joseph M Reinhardt; Sven Kabus; Kai Ding; Xiang Deng; Kunlin Cao; Kaifang Du; Gary E Christensen; Vincent Garcia; Tom Vercauteren; Nicholas Ayache; Olivier Commowick; Grégoire Malandain; Ben Glocker; Nikos Paragios; Nassir Navab; Vladlena Gorbunova; Jon Sporring; Marleen de Bruijne; Xiao Han; Mattias P Heinrich; Julia A Schnabel; Mark Jenkinson; Cristian Lorenz; Marc Modat; Jamie R McClelland; Sébastien Ourselin; Sascha E A Muenzing; Max A Viergever; Dante De Nigris; D Louis Collins; Tal Arbel; Marta Peroni; Rui Li; Gregory C Sharp; Alexander Schmidt-Richberg; Jan Ehrhardt; René Werner; Dirk Smeets; Dirk Loeckx; Gang Song; Nicholas Tustison; Brian Avants; James C Gee; Marius Staring; Stefan Klein; Berend C Stoel; Martin Urschler; Manuel Werlberger; Jef Vandemeulebroucke; Simon Rit; David Sarrut; Josien P W Pluim
Journal:  IEEE Trans Med Imaging       Date:  2011-05-31       Impact factor: 10.048

5.  Entropy and Laplacian images: structural representations for multi-modal registration.

Authors:  Christian Wachinger; Nassir Navab
Journal:  Med Image Anal       Date:  2011-03-23       Impact factor: 8.545

Review 6.  The treatment of spinal metastases.

Authors:  Karl-Stefan Delank; Clemens Wendtner; Hans Theodor Eich; Peer Eysel
Journal:  Dtsch Arztebl Int       Date:  2011-02-04       Impact factor: 5.594

7.  Navigation-assisted surgery for tumors of the spine.

Authors:  S Bandiera; R Ghermandi; A Gasbarrini; G Barbanti Bròdano; S Colangeli; S Boriani
Journal:  Eur Spine J       Date:  2013-09-24       Impact factor: 3.134

8.  Large deformation diffeomorphism and momentum based hippocampal shape discrimination in dementia of the Alzheimer type.

Authors:  Lei Wang; Faisal Beg; Tilak Ratnanather; Can Ceritoglu; Laurent Younes; John C Morris; John G Csernansky; Michael I Miller
Journal:  IEEE Trans Med Imaging       Date:  2007-04       Impact factor: 10.048

Review 9.  Advancements in the management of spine disorders.

Authors:  Scott Haldeman; Deborah Kopansky-Giles; Eric L Hurwitz; Damian Hoy; W Mark Erwin; Simon Dagenais; Greg Kawchuk; Björn Strömqvist; Nicolas Walsh
Journal:  Best Pract Res Clin Rheumatol       Date:  2012-04       Impact factor: 4.098

10.  Diffeomorphic registration using geodesic shooting and Gauss-Newton optimisation.

Authors:  John Ashburner; Karl J Friston
Journal:  Neuroimage       Date:  2011-01-07       Impact factor: 6.556

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  10 in total

1.  Performance evaluation of MIND demons deformable registration of MR and CT images in spinal interventions.

Authors:  S Reaungamornrat; T De Silva; A Uneri; J Goerres; M Jacobson; M Ketcha; S Vogt; G Kleinszig; A J Khanna; J-P Wolinsky; J L Prince; J H Siewerdsen
Journal:  Phys Med Biol       Date:  2016-11-03       Impact factor: 3.609

2.  DiffeoRaptor: diffeomorphic inter-modal image registration using RaPTOR.

Authors:  Nima Masoumi; Hassan Rivaz; M Omair Ahmad; Yiming Xiao
Journal:  Int J Comput Assist Radiol Surg       Date:  2022-09-29       Impact factor: 3.421

3.  Inter-scanner Variation Independent Descriptors for Constrained Diffeomorphic Demons Registration of Retina OCT.

Authors:  S Reaungamornrat; A Carass; Y He; S Saidha; P A Calabresi; J L Prince
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2018-03-02

4.  A level-wise spine registration framework to account for large pose changes.

Authors:  Yunliang Cai; Shaoju Wu; Xiaoyao Fan; Jonathan Olson; Linton Evans; Scott Lollis; Sohail K Mirza; Keith D Paulsen; Songbai Ji
Journal:  Int J Comput Assist Radiol Surg       Date:  2021-05-10       Impact factor: 3.421

5.  Brain CT registration using hybrid supervised convolutional neural network.

Authors:  Hongmei Yuan; Minglei Yang; Shan Qian; Wenxin Wang; Xiaotian Jia; Feng Huang
Journal:  Biomed Eng Online       Date:  2021-12-29       Impact factor: 2.819

6.  Subclinical Diabetic Peripheral Vascular Disease and Epidemiology Using Logistic Regression Mathematical Model and Medical Image Registration Algorithm.

Authors:  Nailong Jia; Long Fan; Chuizhi Wang; Qimao Fu; Yan Chen; Changkun Lin; Yupeng Zhang
Journal:  J Healthc Eng       Date:  2022-01-17       Impact factor: 2.682

7.  Medical Image Registration Algorithm Based on Bounded Generalized Gaussian Mixture Model.

Authors:  Jingkun Wang; Kun Xiang; Kuo Chen; Rui Liu; Ruifeng Ni; Hao Zhu; Yan Xiong
Journal:  Front Neurosci       Date:  2022-06-02       Impact factor: 5.152

8.  A momentum-based diffeomorphic demons framework for deformable MR-CT image registration.

Authors:  R Han; T De Silva; M Ketcha; A Uneri; J H Siewerdsen
Journal:  Phys Med Biol       Date:  2018-10-24       Impact factor: 4.174

9.  An Indirect Multimodal Image Registration and Completion Method Guided by Image Synthesis.

Authors:  Huan Yang; Pengjiang Qian; Chao Fan
Journal:  Comput Math Methods Med       Date:  2020-06-30       Impact factor: 2.238

10.  To Align Multimodal Lumbar Spine Images via Bending Energy Constrained Normalized Mutual Information.

Authors:  Shibin Wu; Pin He; Shaode Yu; Shoujun Zhou; Jun Xia; Yaoqin Xie
Journal:  Biomed Res Int       Date:  2020-07-10       Impact factor: 3.411

  10 in total

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