Literature DB >> 27294984

Determination of Relative Configuration from Residual Chemical Shift Anisotropy.

Nilamoni Nath1, Manuel Schmidt1, Roberto R Gil2, R Thomas Williamson3, Gary E Martin3, Armando Navarro-Vázquez4,5, Christian Griesinger1, Yizhou Liu3.   

Abstract

Determination of relative configuration is frequently a rate-limiting step in the characterization of small organic molecules. Solution NMR-based nuclear Overhauser effect and scalar J-coupling constants can provide useful spatial information but often fail when stereocenters are separated by more than 4-5 Å. Residual dipolar couplings (RDCs) can provide a means of assigning relative configuration without limits of distance between stereocenters. However, sensitivity limits their application. Chemical shift is the most readily measured NMR parameter, and partial molecular alignment can reveal the anisotropic component of the chemical shift tensor, manifested as residual chemical shift anisotropy (RCSA). Hence, (13)C RCSAs provide information on the relative orientations of specific structural moieties including nonprotonated carbons and can be used for stereochemical assignment. Herein, we present two robust and sensitive methods to accurately measure and apply (13)C RCSAs for stereochemical assignment. The complementary techniques are demonstrated with five molecules representing differing structural classes.

Entities:  

Year:  2016        PMID: 27294984     DOI: 10.1021/jacs.6b04082

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  13 in total

1.  Synergism of anisotropic and computational NMR methods reveals the likely configuration of phormidolide A.

Authors:  Ikenna E Ndukwe; Xiao Wang; Nelson Y S Lam; Kristaps Ermanis; Kelsey L Alexander; Matthew J Bertin; Gary E Martin; Garrett Muir; Ian Paterson; Robert Britton; Jonathan M Goodman; Eric J N Helfrich; Jörn Piel; William H Gerwick; R Thomas Williamson
Journal:  Chem Commun (Camb)       Date:  2020-07-09       Impact factor: 6.222

2.  Characterization by Empirical and Computational Methods of Dictyospiromide, an Intriguing Antioxidant Alkaloid from the Marine Alga Dictyota coriacea.

Authors:  Pengcheng Yan; Ge Li; Chaojie Wang; Jianzhang Wu; Zhongmin Sun; Gary E Martin; Xiao Wang; Mikhail Reibarkh; Josep Saurí; Kirk R Gustafson
Journal:  Org Lett       Date:  2019-09-06       Impact factor: 6.005

3.  Unequivocal determination of complex molecular structures using anisotropic NMR measurements.

Authors:  Yizhou Liu; Josep Saurí; Emily Mevers; Mark W Peczuh; Henk Hiemstra; Jon Clardy; Gary E Martin; R Thomas Williamson
Journal:  Science       Date:  2017-04-07       Impact factor: 47.728

Review 4.  Ethnobotany and the Role of Plant Natural Products in Antibiotic Drug Discovery.

Authors:  Gina Porras; François Chassagne; James T Lyles; Lewis Marquez; Micah Dettweiler; Akram M Salam; Tharanga Samarakoon; Sarah Shabih; Darya Raschid Farrokhi; Cassandra L Quave
Journal:  Chem Rev       Date:  2020-11-09       Impact factor: 60.622

5.  Homodimericin A: A Complex Hexacyclic Fungal Metabolite.

Authors:  Emily Mevers; Josep Saurí; Yizhou Liu; Arvin Moser; Timothy R Ramadhar; Maria Varlan; R Thomas Williamson; Gary E Martin; Jon Clardy
Journal:  J Am Chem Soc       Date:  2016-09-16       Impact factor: 15.419

Review 6.  Residual Dipolar Couplings in Structure Determination of Natural Products.

Authors:  Gao-Wei Li; Han Liu; Feng Qiu; Xiao-Juan Wang; Xin-Xiang Lei
Journal:  Nat Prod Bioprospect       Date:  2018-06-25

Review 7.  Computationally-assisted discovery and structure elucidation of natural products.

Authors:  Alfarius Eko Nugroho; Hiroshi Morita
Journal:  J Nat Med       Date:  2019-05-15       Impact factor: 2.343

8.  Configuration determination by residual dipolar couplings: accessing the full conformational space by molecular dynamics with tensorial constraints.

Authors:  Pavleta Tzvetkova; Ulrich Sternberg; Thomas Gloge; Armando Navarro-Vázquez; Burkhard Luy
Journal:  Chem Sci       Date:  2019-07-29       Impact factor: 9.825

9.  Unequivocal determination of caulamidines A and B: application and validation of new tools in the structure elucidation tool box.

Authors:  Dennis J Milanowski; Naoya Oku; Laura K Cartner; Heidi R Bokesch; R Thomas Williamson; Josep Saurí; Yizhou Liu; Kirill A Blinov; Yuanqing Ding; Xing-Cong Li; Daneel Ferreira; Larry A Walker; Shabana Khan; Michael T Davies-Coleman; James A Kelley; James B McMahon; Gary E Martin; Kirk R Gustafson
Journal:  Chem Sci       Date:  2017-11-06       Impact factor: 9.825

10.  Relative configuration of micrograms of natural compounds using proton residual chemical shift anisotropy.

Authors:  Nilamoni Nath; Juan Carlos Fuentes-Monteverde; Dawrin Pech-Puch; Jaime Rodríguez; Carlos Jiménez; Markus Noll; Alexander Kreiter; Michael Reggelin; Armando Navarro-Vázquez; Christian Griesinger
Journal:  Nat Commun       Date:  2020-09-01       Impact factor: 14.919

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