Literature DB >> 27288951

Deciphering single cell metabolism by coherent Raman scattering microscopy.

Shuhua Yue1, Ji-Xin Cheng2.   

Abstract

Metabolism is highly dynamic and intrinsically heterogeneous at the cellular level. Although fluorescence microscopy has been commonly used for single cell analysis, bulky fluorescent probes often perturb the biological activities of small biomolecules such as metabolites. Such challenge can be overcome by a vibrational imaging technique known as coherent Raman scattering microscopy, which is capable of chemically selective, highly sensitive, and high-speed imaging of biomolecules with submicron resolution. Such capability has enabled quantitative assessments of metabolic activities of biomolecules (e.g. lipids, proteins, nucleic acids) in single live cells in vitro and in vivo. These investigations provide new insights into the role of cell metabolism in maintenance of homeostasis and pathogenesis of diseases.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27288951      PMCID: PMC5018428          DOI: 10.1016/j.cbpa.2016.05.016

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  76 in total

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Authors:  Yasuyuki Ozeki; Fumihiro Dake; Shin'ichiro Kajiyama; Kiichi Fukui; Kazuyoshi Itoh
Journal:  Opt Express       Date:  2009-03-02       Impact factor: 3.894

Review 2.  Role of cholesterol and lipid organization in disease.

Authors:  Frederick R Maxfield; Ira Tabas
Journal:  Nature       Date:  2005-12-01       Impact factor: 49.962

Review 3.  How cancer metabolism is tuned for proliferation and vulnerable to disruption.

Authors:  Almut Schulze; Adrian L Harris
Journal:  Nature       Date:  2012-11-15       Impact factor: 49.962

4.  Differential association of adipophilin and TIP47 proteins with cytoplasmic lipid droplets in mouse enterocytes during dietary fat absorption.

Authors:  Bonggi Lee; Jiabin Zhu; Nathan E Wolins; Ji-Xin Cheng; Kimberly K Buhman
Journal:  Biochim Biophys Acta       Date:  2009-08-20

5.  Investigation of lipid homeostasis in living Drosophila by coherent anti-Stokes Raman scattering microscopy.

Authors:  Cheng-Hao Chien; Wei-Wen Chen; June-Tai Wu; Ta-Chau Chang
Journal:  J Biomed Opt       Date:  2012-12       Impact factor: 3.170

6.  Selective imaging of saturated and unsaturated lipids by wide-field CARS-microscopy.

Authors:  Christoph Heinrich; Alexander Hofer; Andreas Ritsch; Christian Ciardi; Stefan Bernet; Monika Ritsch-Marte
Journal:  Opt Express       Date:  2008-02-18       Impact factor: 3.894

7.  Genome-wide RNAi analysis of Caenorhabditis elegans fat regulatory genes.

Authors:  Kaveh Ashrafi; Francesca Y Chang; Jennifer L Watts; Andrew G Fraser; Ravi S Kamath; Julie Ahringer; Gary Ruvkun
Journal:  Nature       Date:  2003-01-16       Impact factor: 49.962

8.  Remodeling of lipid droplets during lipolysis and growth in adipocytes.

Authors:  Margret Paar; Christian Jüngst; Noemi A Steiner; Christoph Magnes; Frank Sinner; Dagmar Kolb; Achim Lass; Robert Zimmermann; Andreas Zumbusch; Sepp D Kohlwein; Heimo Wolinski
Journal:  J Biol Chem       Date:  2012-02-06       Impact factor: 5.157

Review 9.  Chemical contrast for imaging living systems: molecular vibrations drive CARS microscopy.

Authors:  John Paul Pezacki; Jessie A Blake; Dana C Danielson; David C Kennedy; Rodney K Lyn; Ragunath Singaravelu
Journal:  Nat Chem Biol       Date:  2011-03       Impact factor: 15.040

10.  Coherent anti-Stokes Raman scattering imaging of lipids in cancer metastasis.

Authors:  Thuc T Le; Terry B Huff; Ji-Xin Cheng
Journal:  BMC Cancer       Date:  2009-01-30       Impact factor: 4.430

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  13 in total

1.  Broadband hyperspectral stimulated Raman scattering microscopy with a parabolic fiber amplifier source.

Authors:  Benjamin Figueroa; Walter Fu; Tai Nguyen; Kseniya Shin; Bryce Manifold; Frank Wise; Dan Fu
Journal:  Biomed Opt Express       Date:  2018-11-08       Impact factor: 3.732

2.  Quantifying enzyme activity in living cells.

Authors:  Agnes Zotter; Felix Bäuerle; Debabrata Dey; Vladimir Kiss; Gideon Schreiber
Journal:  J Biol Chem       Date:  2017-08-07       Impact factor: 5.157

3.  In situ visualization of intracellular morphology of epidermal cells using stimulated Raman scattering microscopy.

Authors:  Mariko Egawa; Kyoya Tokunaga; Junichi Hosoi; Shinya Iwanaga; Yasuyuki Ozeki
Journal:  J Biomed Opt       Date:  2016-08-01       Impact factor: 3.170

Review 4.  Mammalian cell and tissue imaging using Raman and coherent Raman microscopy.

Authors:  Anthony A Fung; Lingyan Shi
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2020-07-19

5.  SRS-FISH: A high-throughput platform linking microbiome metabolism to identity at the single-cell level.

Authors:  Xiaowei Ge; Fátima C Pereira; Matthias Mitteregger; David Berry; Meng Zhang; Bela Hausmann; Jing Zhang; Arno Schintlmeister; Michael Wagner; Ji-Xin Cheng
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-21       Impact factor: 12.779

6.  Deciphering Metabolic Heterogeneity by Single-Cell Analysis.

Authors:  Tom M J Evers; Mazène Hochane; Sander J Tans; Ron M A Heeren; Stefan Semrau; Peter Nemes; Alireza Mashaghi
Journal:  Anal Chem       Date:  2019-10-08       Impact factor: 6.986

7.  High-Speed Chemical Imaging by Dense-Net Learning of Femtosecond Stimulated Raman Scattering.

Authors:  Jing Zhang; Jian Zhao; Haonan Lin; Yuying Tan; Ji-Xin Cheng
Journal:  J Phys Chem Lett       Date:  2020-09-25       Impact factor: 6.888

Review 8.  Vibrational Spectroscopy for Imaging Single Microbial Cells in Complex Biological Samples.

Authors:  Jesse P Harrison; David Berry
Journal:  Front Microbiol       Date:  2017-04-13       Impact factor: 5.640

Review 9.  Raman Spectroscopy and Imaging for Cancer Diagnosis.

Authors:  Sishan Cui; Shuo Zhang; Shuhua Yue
Journal:  J Healthc Eng       Date:  2018-06-07       Impact factor: 2.682

10.  Toward Quantitative in vivo Label-Free Tracking of Lipid Distribution in a Zebrafish Cancer Model.

Authors:  Marco Andreana; Caterina Sturtzel; Clemens P Spielvogel; Laszlo Papp; Rainer Leitgeb; Wolfgang Drexler; Martin Distel; Angelika Unterhuber
Journal:  Front Cell Dev Biol       Date:  2021-07-01
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