Literature DB >> 27272408

Whole exome sequencing identifies multiple diagnoses in congenital glaucoma with systemic anomalies.

L M Reis1, R C Tyler1, E Weh1,2, K E Hendee1,2, K F Schilter1,2, J A Phillips3, S Sequeira4, A Schinzel5, E V Semina6,7,8.   

Abstract

The genetic basis of congenital glaucoma with systemic anomalies is largely unknown. Whole exome sequencing (WES) in 10 probands with congenital glaucoma and variable systemic anomalies identified pathogenic or likely pathogenic variants in three probands; in two of these, a combination of two Mendelian disorders was found to completely explain the patients' features whereas in the third case only the ocular findings could be explained by the genetic diagnosis. The molecular diagnosis for glaucoma included two cases with compound heterozygous or homozygous pathogenic alleles in CYP1B1 and one family with a dominant pathogenic variant in FOXC1; the second genetic diagnosis for the additional systemic features included compound heterozygous mutations in NPHS1 in one family and a heterozygous 18q23 deletion in another pedigree. These findings show the power of WES in the analysis of complex conditions and emphasize the importance of CYP1B1 screening in patients with congenital glaucoma regardless of the presence/absence of other systemic anomalies.
© 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  18q23 deletion; CYP1B1; FOXC1; NPHS1; congenital glaucoma; exome sequencing; multiple diagnoses

Mesh:

Substances:

Year:  2016        PMID: 27272408      PMCID: PMC5295561          DOI: 10.1111/cge.12816

Source DB:  PubMed          Journal:  Clin Genet        ISSN: 0009-9163            Impact factor:   4.438


  10 in total

Review 1.  Role of CYP1B1 in glaucoma.

Authors:  Vasilis Vasiliou; Frank J Gonzalez
Journal:  Annu Rev Pharmacol Toxicol       Date:  2008       Impact factor: 13.820

Review 2.  Molecular genetics in glaucoma.

Authors:  Yutao Liu; R Rand Allingham
Journal:  Exp Eye Res       Date:  2011-08-18       Impact factor: 3.467

3.  Molecular findings among patients referred for clinical whole-exome sequencing.

Authors:  Yaping Yang; Donna M Muzny; Fan Xia; Zhiyv Niu; Richard Person; Yan Ding; Patricia Ward; Alicia Braxton; Min Wang; Christian Buhay; Narayanan Veeraraghavan; Alicia Hawes; Theodore Chiang; Magalie Leduc; Joke Beuten; Jing Zhang; Weimin He; Jennifer Scull; Alecia Willis; Megan Landsverk; William J Craigen; Mir Reza Bekheirnia; Asbjorg Stray-Pedersen; Pengfei Liu; Shu Wen; Wendy Alcaraz; Hong Cui; Magdalena Walkiewicz; Jeffrey Reid; Matthew Bainbridge; Ankita Patel; Eric Boerwinkle; Arthur L Beaudet; James R Lupski; Sharon E Plon; Richard A Gibbs; Christine M Eng
Journal:  JAMA       Date:  2014-11-12       Impact factor: 56.272

4.  Whole-genome copy number variation analysis in anophthalmia and microphthalmia.

Authors:  K F Schilter; L M Reis; A Schneider; T M Bardakjian; O Abdul-Rahman; B A Kozel; H H Zimmerman; U Broeckel; E V Semina
Journal:  Clin Genet       Date:  2013-06-17       Impact factor: 4.438

5.  PITX2 and FOXC1 spectrum of mutations in ocular syndromes.

Authors:  Linda M Reis; Rebecca C Tyler; Bethany A Volkmann Kloss; Kala F Schilter; Alex V Levin; R Brian Lowry; Petra J G Zwijnenburg; Eliza Stroh; Ulrich Broeckel; Jeffrey C Murray; Elena V Semina
Journal:  Eur J Hum Genet       Date:  2012-05-09       Impact factor: 4.246

6.  Mutation analysis of NPHS1 in a worldwide cohort of congenital nephrotic syndrome patients.

Authors:  Bugsu Ovunc; Shazia Ashraf; Virginia Vega-Warner; Detlef Bockenhauer; Neveen A Soliman Elshakhs; Mark Joseph; Friedhelm Hildebrandt
Journal:  Nephron Clin Pract       Date:  2012-05-11

7.  Genotype-phenotype mapping of chromosome 18q deletions by high-resolution array CGH: an update of the phenotypic map.

Authors:  Ilse Feenstra; Lisenka E L M Vissers; Mirjam Orsel; Ad Geurts van Kessel; Han G Brunner; Joris A Veltman; Conny M A van Ravenswaaij-Arts
Journal:  Am J Med Genet A       Date:  2007-08-15       Impact factor: 2.802

8.  Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Authors:  Sue Richards; Nazneen Aziz; Sherri Bale; David Bick; Soma Das; Julie Gastier-Foster; Wayne W Grody; Madhuri Hegde; Elaine Lyon; Elaine Spector; Karl Voelkerding; Heidi L Rehm
Journal:  Genet Med       Date:  2015-03-05       Impact factor: 8.822

Review 9.  The Human Gene Mutation Database: building a comprehensive mutation repository for clinical and molecular genetics, diagnostic testing and personalized genomic medicine.

Authors:  Peter D Stenson; Matthew Mort; Edward V Ball; Katy Shaw; Andrew Phillips; David N Cooper
Journal:  Hum Genet       Date:  2014-01       Impact factor: 4.132

10.  Novel mutations in PAX6, OTX2 and NDP in anophthalmia, microphthalmia and coloboma.

Authors:  Brett Deml; Linda M Reis; Emmanuelle Lemyre; Robin D Clark; Ariana Kariminejad; Elena V Semina
Journal:  Eur J Hum Genet       Date:  2015-07-01       Impact factor: 4.246

  10 in total
  5 in total

1.  Disruption of foxc1 genes in zebrafish results in dosage-dependent phenotypes overlapping Axenfeld-Rieger syndrome.

Authors:  Jesús-José Ferre-Fernández; Elena A Sorokina; Samuel Thompson; Ross F Collery; Emily Nordquist; Joy Lincoln; Elena V Semina
Journal:  Hum Mol Genet       Date:  2020-09-29       Impact factor: 6.150

Review 2.  Childhood glaucoma genes and phenotypes: Focus on FOXC1 mutations causing anterior segment dysgenesis and hearing loss.

Authors:  Angela C Gauthier; Janey L Wiggs
Journal:  Exp Eye Res       Date:  2019-12-11       Impact factor: 3.467

Review 3.  Fatal familial insomnia with abnormal signals on routine MRI: a case report and literature review.

Authors:  Tingting Lu; Yuhang Pan; Lisheng Peng; Feng Qin; Xiaobo Sun; Zhengqi Lu; Wei Qiu
Journal:  BMC Neurol       Date:  2017-05-26       Impact factor: 2.474

4.  Detection of mutations in MYOC, OPTN, NTF4, WDR36 and CYP1B1 in Chinese juvenile onset open-angle glaucoma using exome sequencing.

Authors:  Chukai Huang; Lijing Xie; Zhenggen Wu; Yingjie Cao; Yuqian Zheng; Chi-Pui Pang; Mingzhi Zhang
Journal:  Sci Rep       Date:  2018-03-14       Impact factor: 4.379

5.  Variable Anterior Segment Dysgenesis and Cardiac Anomalies Caused by a Novel Truncating Variant of FOXC1.

Authors:  Mariya R Ahmed; Saumil Sethna; Laura A Krueger; Michael B Yang; Robert B Hufnagel
Journal:  Genes (Basel)       Date:  2022-02-24       Impact factor: 4.096

  5 in total

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