Literature DB >> 27266330

Structure and mechanism of assembly line polyketide synthases.

Thomas Robbins1, Yu-Chen Liu1, David E Cane2, Chaitan Khosla3.   

Abstract

Assembly line polyketide synthases (PKSs) are remarkable biosynthetic machines with considerable potential for structure-based engineering. Several types of protein-protein interactions, both within and between PKS modules, play important roles in the catalytic cycle of a multimodular PKS. Additionally, vectorial biosynthesis is enabled by the energetic coupling of polyketide chain elongation to the channeling of intermediates between successive modules. A combination of high-resolution analysis of smaller PKS components and lower resolution characterization of intact modules and bimodules has yielded insights into the structure and organization of a prototypical assembly line PKS. This review discusses our understanding of key structure-function relationships in this family of megasynthases, along with a recap of key unanswered questions in the field.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27266330      PMCID: PMC5136517          DOI: 10.1016/j.sbi.2016.05.009

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  45 in total

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Authors:  S C Tsai; L J Miercke; J Krucinski; R Gokhale; J C Chen; P G Foster; D E Cane; C Khosla; R M Stroud
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-18       Impact factor: 11.205

2.  The structure of docking domains in modular polyketide synthases.

Authors:  R William Broadhurst; Daniel Nietlispach; Michael P Wheatcroft; Peter F Leadlay; Kira J Weissman
Journal:  Chem Biol       Date:  2003-08

3.  Understanding substrate specificity of polyketide synthase modules by generating hybrid multimodular synthases.

Authors:  Kenji Watanabe; Clay C C Wang; Christopher N Boddy; David E Cane; Chaitan Khosla
Journal:  J Biol Chem       Date:  2003-08-15       Impact factor: 5.157

Review 4.  Polyketide and nonribosomal peptide antibiotics: modularity and versatility.

Authors:  Christopher T Walsh
Journal:  Science       Date:  2004-03-19       Impact factor: 47.728

5.  Structure-based analysis of the molecular interactions between acyltransferase and acyl carrier protein in vicenistatin biosynthesis.

Authors:  Akimasa Miyanaga; Shohei Iwasawa; Yuji Shinohara; Fumitaka Kudo; Tadashi Eguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-01       Impact factor: 11.205

6.  Identification of DEBS 1, DEBS 2 and DEBS 3, the multienzyme polypeptides of the erythromycin-producing polyketide synthase from Saccharopolyspora erythraea.

Authors:  P Caffrey; D J Bevitt; J Staunton; P F Leadlay
Journal:  FEBS Lett       Date:  1992-06-15       Impact factor: 4.124

Review 7.  Isoprenoid-like alkylations in polyketide biosynthesis.

Authors:  Christopher T Calderone
Journal:  Nat Prod Rep       Date:  2008-06-18       Impact factor: 13.423

8.  Evidence for two catalytically independent clusters of active sites in a functional modular polyketide synthase.

Authors:  C M Kao; R Pieper; D E Cane; C Khosla
Journal:  Biochemistry       Date:  1996-09-24       Impact factor: 3.162

9.  Solution structure and proposed domain domain recognition interface of an acyl carrier protein domain from a modular polyketide synthase.

Authors:  Viktor Y Alekseyev; Corey W Liu; David E Cane; Joseph D Puglisi; Chaitan Khosla
Journal:  Protein Sci       Date:  2007-10       Impact factor: 6.725

10.  Divergence of multimodular polyketide synthases revealed by a didomain structure.

Authors:  Jianting Zheng; Darren C Gay; Borries Demeler; Mark A White; Adrian T Keatinge-Clay
Journal:  Nat Chem Biol       Date:  2012-05-27       Impact factor: 15.040

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  44 in total

1.  Formation of an Angular Aromatic Polyketide from a Linear Anthrene Precursor via Oxidative Rearrangement.

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Journal:  Cell Chem Biol       Date:  2017-07-14       Impact factor: 8.116

2.  Engineering fatty acid synthases for directed polyketide production.

Authors:  Jan Gajewski; Floris Buelens; Sascha Serdjukow; Melanie Janßen; Niña Cortina; Helmut Grubmüller; Martin Grininger
Journal:  Nat Chem Biol       Date:  2017-02-20       Impact factor: 15.040

Review 3.  X-ray Scattering Studies of Protein Structural Dynamics.

Authors:  Steve P Meisburger; William C Thomas; Maxwell B Watkins; Nozomi Ando
Journal:  Chem Rev       Date:  2017-05-30       Impact factor: 60.622

4.  Burkholderia as a Source of Natural Products.

Authors:  Sylvia Kunakom; Alessandra S Eustáquio
Journal:  J Nat Prod       Date:  2019-07-11       Impact factor: 4.050

5.  Protein-Protein Interactions, Not Substrate Recognition, Dominate the Turnover of Chimeric Assembly Line Polyketide Synthases.

Authors:  Maja Klaus; Matthew P Ostrowski; Jonas Austerjost; Thomas Robbins; Brian Lowry; David E Cane; Chaitan Khosla
Journal:  J Biol Chem       Date:  2016-05-31       Impact factor: 5.157

6.  Synthetic biology of polyketide synthases.

Authors:  Satoshi Yuzawa; Tyler W H Backman; Jay D Keasling; Leonard Katz
Journal:  J Ind Microbiol Biotechnol       Date:  2018-02-09       Impact factor: 3.346

7.  From Active Sites to Machines: A Challenge for Enzyme Chemists.

Authors:  Chaitan Khosla
Journal:  Isr J Chem       Date:  2018-10-11       Impact factor: 3.333

8.  The Conformational Flexibility of the Acyltransferase from the Disorazole Polyketide Synthase Is Revealed by an X-ray Free-Electron Laser Using a Room-Temperature Sample Delivery Method for Serial Crystallography.

Authors:  Irimpan I Mathews; Kim Allison; Thomas Robbins; Artem Y Lyubimov; Monarin Uervirojnangkoorn; Axel T Brunger; Chaitan Khosla; Hasan DeMirci; Scott E McPhillips; Michael Hollenbeck; Michael Soltis; Aina E Cohen
Journal:  Biochemistry       Date:  2017-08-31       Impact factor: 3.162

9.  Active Multienzyme Assemblies for Long-Chain Olefinic Hydrocarbon Biosynthesis.

Authors:  James K Christenson; Matthew R Jensen; Brandon R Goblirsch; Fatuma Mohamed; Wei Zhang; Carrie M Wilmot; Lawrence P Wackett
Journal:  J Bacteriol       Date:  2017-04-11       Impact factor: 3.490

10.  Roles of Conserved Active Site Residues in the Ketosynthase Domain of an Assembly Line Polyketide Synthase.

Authors:  Thomas Robbins; Joshuah Kapilivsky; David E Cane; Chaitan Khosla
Journal:  Biochemistry       Date:  2016-08-03       Impact factor: 3.162

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