| Literature DB >> 27265247 |
Anna-Carin C Carlsson1, Krenare Mehmeti1, Martin Uhrbom1, Alavi Karim1, Michele Bedin1, Rakesh Puttreddy2, Roland Kleinmaier1, Alexei A Neverov3, Bijan Nekoueishahraki1, Jürgen Gräfenstein1, Kari Rissanen2, Máté Erdélyi1,4.
Abstract
We have investigated the influence of electronEntities:
Year: 2016 PMID: 27265247 PMCID: PMC4981895 DOI: 10.1021/jacs.6b03842
Source DB: PubMed Journal: J Am Chem Soc ISSN: 0002-7863 Impact factor: 15.419
Figure 1[Bis(4-R-pyridine)iodine]+ BF4– (1a–g), and geometrically restrained [1,2-bis((4-R-pyridine-2-ylethynyl)benzene)iodine]+ BF4– (2a–g) were used as model systems for evaluation of the influence of electron density alteration on the [N–I–N]+ halogen bond. A systematic alteration of the electron density of the [N–I–N]+ halogen bond was achieved by variation of the R-substituents, resulting in complexes with an increasing electron density in the order NO2 < CF3 < H < F < Me < OMe < NMe2. Complex 1 permits free rotation and adjustment of N–I distances for the most favorable interaction, whereas the 1,2-diethynylbenzene backbone of 2 inhibits rotation around the N–I–N axis and imposes some strain in the N–I bonds to reach a geometrically optimal [N–I–N]+ interaction. A mixture of 2a–d and their monodeuterated isotopologs 2a–d- were used in IPE NMR experiments for determining the geometry of their [N–I–N]+ halogen bonds.
Scheme 1General Synthetic Route for the Synthesis of 4-Substituted [1,2-Bis((pyridine-2-ylethynyl)benzene)iodine]+ BF4– Complexes 2a (4-H), 2b (4-Me), 2c (4-OMe), 2d (4-NMe2), 2e (4-F), 2f (4-CF3), and 2g (4-NO2) and Their Selectively Monodeuterated Analogues 2a-d,g-
Scheme 2Reagents and Conditions: (a) 4g (2.2 equiv), Pd(PPh3)2Cl2, CuI, Et3N, 75 °C, 5 h, then rt, 18 h; (b) Fe, AcOH, 55 °C, 1.5 h; (c) CH2O, NaBH3CN, AcOH, rt, 24 h; (d) AgBF4, CH2Cl2, rt, 20 min; (e) I2, CH2Cl2, rt, 30 min; (f) 4g (0.8 equiv), Pd(PPh3)2Cl2, CuI, Et3N, 75 °C, 3 h; (g) 4g- (2.1 equiv), Pd(PPh3)2Cl2, CuI, Et3N, 75 °C, 20 h.
Scheme 3Reagents and Conditions: (a) 1. nBuLi (1 equiv), THF, −78 °C; 2. MeOD (5 equiv), −78 °C, 1 h, then rt, 24 h; (b) mCPBA, CHCl3, rt, 24 h; (c) HNO3/H2SO4 2:1, 110 °C, 3 h; (d) PBr3, CH2Cl2, 60 °C 3 h; (e) TMS-acetylene, Pd(PPh3)2Cl2, CuI, Et3N, 5 °C, 1 h, then rt, 2 h; (f) KF, MeOH, rt, 2 h; (g) K2CO3, THF/MeOH 1:1, rt, 1 h.
Calculated Changes Upon Substitution for Natural Atomic Populations Δn(N) and π Orbital Populations Δnπ(N) for the N atoms of Iodine(I) Complexes 1a–g and 2a–g, versus Hammett and Resonance Substituent Constants
| structure | 4-R | σpara | 103 × Δ | 103 × Δ | |
|---|---|---|---|---|---|
| H | 0 | 0 | 0 | 0 | |
| Me | –0.17 | 3.0 | –0.18 | 12.7 | |
| OMe | –0.27 | 5.9 | –0.56 | 42.6 | |
| NMe2 | –0.83 | 18.5 | –0.98 | 73.2 | |
| F | 0.06 | –7.9 | –0.39 | 16.7 | |
| CF3 | 0.54 | –17.7 | 0.16 | –15.5 | |
| NO2 | 0.78 | –30.7 | 0.13 | –25.9 | |
| H | 0 | 0 | 0 | 0 | |
| Me | –0.17 | 2.7 | –0.18 | 11.6 | |
| OMe | –0.27 | 5.9 | –0.56 | 39.8 | |
| NMe2 | –0.83 | 17.1 | –0.98 | 69.2 | |
| F | 0.06 | –6.3 | –0.39 | 16.9 | |
| CF3 | 0.54 | –15.1 | 0.16 | –11.4 | |
| NO2 | 0.78 | –26.7 | 0.13 | –19.1 |
15N NMR Chemical Shift (ppm) of Iodine(I) Complexes 1a–d,f and 2a–f, and of the Corresponding Nitrogen Basesa
| structure | 4-R | δ 15Ncomplex | δ 15Nligand | δ 15Ncoord |
|---|---|---|---|---|
| H | –175.1 | –67.0 | –108.1 | |
| Me | –180.2 | –71.6 | –108.6 | |
| OMe | –195.0 | –86.0 | –109.0 | |
| NMe2 | –214.2 | –104.8 | –109.4 | |
| CF3 | –164.1 | –51.6 | –112.5 | |
| H | –165.5 | –64.5 | –101.0 | |
| Me | –170.2 | –69.2 | –101.0 | |
| OMe | –183.5 | –83.5 | –100.0 | |
| NMe2 | –202.9 | –102.2 | –100.7 | |
| F | –170.9 | –69.5 | –101.4 | |
| CF3 | –156.7 | –50.7 | –106.0 |
The 15N NMR coordination shifts represent the chemical shift change upon complex formation.
Figure 215N NMR chemical shift changes (relative to 1a or 2a, respectively), Δδ15N, of substituted pyridines (●), of the corresponding 1,2-bis((pyridine-2-ylethynyl)benzene) ligands 3a–f (○), and of their [N–I–N]+ complexes, 1a–d,f (▼) and 2a–f (Δ), respectively, strongly correlate to the corresponding changes in the π(N) orbital population. This indicates that the variation in δ15N is dominatingly governed by the paramagnetic ring currents in the pyridine moieties.
Temperature Coefficients (ppm × K) of the 13C Isotope Shifts of Complexes 2a–d, and the Corresponding References 3a–d for a Static Geometry
| structure | 4-R | C2 1Δobs | C3 2Δobs | C4 3Δobs | C5 4Δobs | C6 3Δobs | Σ |Δobs| |
|---|---|---|---|---|---|---|---|
| H | –8.9 | –10.8 | +0.7 | 0 | –2.0 | 22.4 | |
| H | –8.1 | –9.1 | –1.5 | +3.4 | –4.5 | 26.6 | |
| Me | –11.2 | –11.3 | +1.3 | 0 | –2.5 | 26.3 | |
| Me | –8.8 | –8.6 | n.d. | +3.0 | n.d. | (20.4) | |
| OMe | –5.4 | –11.5 | +2.3 | 0 | –3.1 | 22.3 | |
| OMe | –5.9 | –8.9 | +2.3 | 0 | 0 | 17.1 | |
| NMe2 | –5.8 | –10.2 | +3.2 | 0 | n.d. | (19.2) | |
| NMe2 | –4.1 | –9.2 | +0.9 | +1.1 | –4.9 | 16.1 |
The 13C{1H,2H} experiments were run at 125.71 MHz.
The 13C{1H,2H} experiments were run at 201.20 MHz.
Temperature interval −20 to 25 °C.
Temperature interval −10 to 25 °C.
Due to minor temperature dependence and to limited solubility, this coefficient could not be reliably determined.
Computationally Predicted N–I and N–N Distances, N–I–N Angles, and Stabilization Energies for Complexes 1a–g and 2a–g and N–N Distances for the Ligands 3a–ga
| structure | 4-R | ∠(NIN) (deg) | Δ | |||
|---|---|---|---|---|---|---|
| H | 2.3036 | 4.6072 | 180 | 0 | ||
| Me | 2.3013 | 4.6026 | 180 | 12.7 | ||
| OMe | 2.2980 | 4.5960 | 180 | 42.6 | ||
| NMe2 | 2.2921 | 4.5841 | 180 | 73.2 | ||
| F | 2.3032 | 4.6063 | 180 | 16.7 | ||
| CF3 | 2.3055 | 4.6109 | 180 | –15.5 | ||
| NO2 | 2.3065 | 4.6131 | 180 | –25.9 | ||
| H | 2.3034 | 4.5934 | 4.6854 | 175.7 | 0 | |
| Me | 2.3011 | 4.5875 | 4.7166 | 175.4 | 11.6 | |
| OMe | 2.2982 | 4.5832 | 4.6586 | 175.7 | 39.8 | |
| NMe2 | 2.2930 | 4.5715 | 4.7700 | 175.4 | 69.2 | |
| F | 2.3027 | 4.5921 | 4.6756 | 175.7 | 16.9 | |
| CF3 | 2.3041 | 4.5939 | 4.6624 | 175.5 | –11.4 | |
| NO2 | 2.3043 | 4.5952 | 4.5880 | 175.7 | –19.1 |
All calculations were done for CH2Cl2 solution with the computational protocol described below.
For all compounds, r(NI)1 = r(NI)2.
[N–I–N]+ complexes 1a–g and 2a–g.
Ligands 3a–g.
Figure 3Correlation of the N–I bond distance with the change in the π(N) population of iodine(I) complexes of substituted pyridines (1a–g) (●) and of the corresponding 1,2-bis((pyridine-2-ylethynyl)benzene) ligands (2a–g) (○).
Scheme 4Formal Reactions Used to Define the Stabilization Energies of Complexes 1a–g and 2a–g
Figure 4Correlation of the stabilization energy (ΔEstab) and the change of the natural atom population at the N atoms of the iodine(I) complexes of substituted pyridines (1a–g) (○) and of the corresponding 1,2-bis((pyridine-2-ylethynyl)benzene) ligands (2a–g) (●).
Figure 5Solid state geometries of complexes 1c (top, CCDC-1452897), and 1f (bottom, CCDC-1452897), obtained by single crystal X-ray crystallography. The BF4– counterion is omitted from the figure for clarity. The crystal of compound 1c was obtained as a solvate, and thus each molecular unit contains one molecule dichloroethane. Both complexes possess coplanar pyridine rings and nearly centrosymmetric geometries.
X-ray Crystallographically Determined N–I Bond Distances and N–I–N Bond Angles for 1a,c,d,f
| structure | 4-R | r(N–X)1 (Å) | r(N–X)2 (Å) | σ (N–X–N) (deg) |
|---|---|---|---|---|
| H | 2.260(3) | 2.260(3) | 180.0 | |
| 2.259(3) | 2.259(3) | 180.0 | ||
| 2.255(3) | 2.260(3) | 177.7(1) | ||
| OMe | 2.252(3) | 2.262(3) | 178.0(1) | |
| NMe2 | 2.232 | 2.239 | 179.4 | |
| 2.247 | 2.252 | 177.7 | ||
| CF3 | 2.251(5) | 2.272(5) | 176.2(2) | |
| 2.256(5) | 2.271(5) | 175.2(2) |
The counterion of 1d is NO3– instead of BF4–. This does not influence the geometry of [bis(pyridine)iodine]+ complexes.
Figure 6Second-order rate constants (M–1 s–1) of 1a,c,d,f in iodocyclization reactions with 4-penten-1-ol in the presence of 4-R-pyridine (R = H, OMe, NMe2 or CF3), normalized to 1 mM, obtained in dry dichloroethane, are shown as a function of the change of natural atomic population, Δn(N). A linear correlation is seen for all but the most electron rich complex 1d.
Dissociation of [Bis(4-R-pyridine)iodine]+ Complexes 1a,c,f (7.68 × 10–5 M) in the Presence of an Excess DMAP (0.15 mM) in Dry Dichloroethane, Observed kobs Dissociation Rate Constants at 298 K, and the Enthalpy and Entropy of Activationa
| structure | 4-R | Δ | Δ | |
|---|---|---|---|---|
| H | 0.392 | 70.97 ± 1.07 | –14.45 ± 3.49 | |
| OCH3 | 0.333 | 72.83 ± 0.80 | –13.23 ± 2.60 | |
| CF3 | 3.322 | 39.16 ± 1.87 | –105.47 ± 6.15 |
Experiments run under stopped-flow with 7.68 × 10–5 M iodine(I) complex 1a,c,f, and 0.15 mM DMAP in the reaction cell.
Observed rate constants kobs determined at 298 K.
Activation parameters, ΔH‡ and ΔS‡, determined from Eyring plots.