Literature DB >> 27261771

On methylene-bridged cysteine and lysine residues in proteins.

Milosz Ruszkowski1, Zbigniew Dauter1.   

Abstract

Cysteine residues ubiquitously stabilize tertiary and quaternary protein structure by formation of disulfide bridges. Here we investigate another linking interaction that involves sulfhydryl groups of cysteines, namely intra- and intermolecular methylene-bridges between cysteine and lysine residues. A number of crystal structures possessing such a linkage were identified in the Protein Data Bank. Inspection of the electron density maps and re-refinement of the nominated structures unequivocally confirmed the presence of Lys-CH2 -Cys bonds in several cases. Published 2016. This article is a U.S. Government work and is in the public domain in the USA.

Entities:  

Keywords:  crosslink; cysteine; intermolecular; intramolecular; lysine; methylene bridge

Mesh:

Substances:

Year:  2016        PMID: 27261771      PMCID: PMC5338236          DOI: 10.1002/pro.2958

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  6 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Structural Studies of Medicago truncatula Histidinol Phosphate Phosphatase from Inositol Monophosphatase Superfamily Reveal Details of Penultimate Step of Histidine Biosynthesis in Plants.

Authors:  Milosz Ruszkowski; Zbigniew Dauter
Journal:  J Biol Chem       Date:  2016-03-18       Impact factor: 5.157

3.  Identification of formaldehyde-induced modifications in proteins: reactions with model peptides.

Authors:  Bernard Metz; Gideon F A Kersten; Peter Hoogerhout; Humphrey F Brugghe; Hans A M Timmermans; Ad de Jong; Hugo Meiring; Jan ten Hove; Wim E Hennink; Daan J A Crommelin; Wim Jiskoot
Journal:  J Biol Chem       Date:  2003-11-24       Impact factor: 5.157

4.  REFMAC5 for the refinement of macromolecular crystal structures.

Authors:  Garib N Murshudov; Pavol Skubák; Andrey A Lebedev; Navraj S Pannu; Roberto A Steiner; Robert A Nicholls; Martyn D Winn; Fei Long; Alexei A Vagin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

5.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

6.  Structural Investigations of N-carbamoylputrescine Amidohydrolase from Medicago truncatula: Insights into the Ultimate Step of Putrescine Biosynthesis in Plants.

Authors:  Bartosz Sekula; Milosz Ruszkowski; Maura Malinska; Zbigniew Dauter
Journal:  Front Plant Sci       Date:  2016-03-30       Impact factor: 5.753

  6 in total
  6 in total

1.  Structure and conformational plasticity of the U6 small nuclear ribonucleoprotein core.

Authors:  Eric J Montemayor; Allison L Didychuk; Honghong Liao; Panzhou Hu; David A Brow; Samuel E Butcher
Journal:  Acta Crystallogr D Struct Biol       Date:  2017-01-01       Impact factor: 7.652

2.  Structural Features of Clostridium botulinum Neurotoxin Subtype A2 Cell Binding Domain.

Authors:  Kyle S Gregory; Tejaswini B Mahadeva; Sai Man Liu; K Ravi Acharya
Journal:  Toxins (Basel)       Date:  2022-05-19       Impact factor: 5.075

3.  [Effect of rhubarb on neonatal rats with bronchopulmonary dysplasia induced by hyperoxia].

Authors:  Ling-Ling Yin; Zhen-Zhi Ye; Li-Jun Tang; Liang Guo; Wei-Min Huang
Journal:  Zhongguo Dang Dai Er Ke Za Zhi       Date:  2018-05

4.  A lysine-cysteine redox switch with an NOS bridge regulates enzyme function.

Authors:  Marie Wensien; Fabian Rabe von Pappenheim; Lisa-Marie Funk; Patrick Kloskowski; Ute Curth; Ulf Diederichsen; Jon Uranga; Jin Ye; Pan Fang; Kuan-Ting Pan; Henning Urlaub; Ricardo A Mata; Viktor Sautner; Kai Tittmann
Journal:  Nature       Date:  2021-05-05       Impact factor: 49.962

5.  Recognizing lysine-cysteine crosslinks in proteins.

Authors:  Brian W Matthews
Journal:  Protein Sci       Date:  2021-07-05       Impact factor: 6.993

6.  High-resolution crystal structures of the botulinum neurotoxin binding domains from subtypes A5 and A6.

Authors:  Jonathan R Davies; Amy Britton; Sai Man Liu; K Ravi Acharya
Journal:  FEBS Open Bio       Date:  2020-07-23       Impact factor: 2.693

  6 in total

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