Literature DB >> 27256387

Controlling the Editor: The Many Roles of RNA-Binding Proteins in Regulating A-to-I RNA Editing.

Michael C Washburn1, Heather A Hundley2.   

Abstract

RNA editing is a cellular process used to expand and diversify the RNA transcripts produced from a generally immutable genome. In animals, the most prevalent type of RNA editing is adenosine (A) to inosine (I) deamination catalyzed by the ADAR family. Throughout development, A-to-I editing levels increase while ADAR expression is constant, suggesting cellular mechanisms to regulate A-to-I editing exist. Furthermore, in several disease states, ADAR expression levels are similar to the normal state, but A-to-I editing levels are altered. Therefore, understanding how these enzymes are regulated in normal tissues and misregulated in disease states is of profound importance. This chapter will both discuss how to identify A-to-I editing sites across the transcriptome and explore the mechanisms that regulate ADAR editing activity, with particular focus on the diverse types of RNA-binding proteins implicated in regulating A-to-I editing in vivo.

Entities:  

Keywords:  ADARs; Inosine; RNA editing; RNA-binding proteins; Splicing

Mesh:

Substances:

Year:  2016        PMID: 27256387     DOI: 10.1007/978-3-319-29073-7_8

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  6 in total

Review 1.  A-to-I RNA editing - thinking beyond the single nucleotide.

Authors:  Nabeel S Ganem; Ayelet T Lamm
Journal:  RNA Biol       Date:  2017-10-11       Impact factor: 4.652

Review 2.  Circles reshaping the RNA world: from waste to treasure.

Authors:  Jing Liu; Tian Liu; Xiaman Wang; Aili He
Journal:  Mol Cancer       Date:  2017-03-09       Impact factor: 27.401

3.  RNA editing in nascent RNA affects pre-mRNA splicing.

Authors:  Yun-Hua Esther Hsiao; Jae Hoon Bahn; Yun Yang; Xianzhi Lin; Stephen Tran; Ei-Wen Yang; Giovanni Quinones-Valdez; Xinshu Xiao
Journal:  Genome Res       Date:  2018-05-03       Impact factor: 9.043

4.  Zinc Finger RNA-Binding Protein Zn72D Regulates ADAR-Mediated RNA Editing in Neurons.

Authors:  Anne L Sapiro; Emily C Freund; Lucas Restrepo; Huan-Huan Qiao; Amruta Bhate; Qin Li; Jian-Quan Ni; Timothy J Mosca; Jin Billy Li
Journal:  Cell Rep       Date:  2020-05-19       Impact factor: 9.423

5.  Illuminating spatial A-to-I RNA editing signatures within the Drosophila brain.

Authors:  Anne L Sapiro; Anat Shmueli; Gilbert Lee Henry; Qin Li; Tali Shalit; Orly Yaron; Yoav Paas; Jin Billy Li; Galit Shohat-Ophir
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-18       Impact factor: 11.205

6.  Profiling neural editomes reveals a molecular mechanism to regulate RNA editing during development.

Authors:  Suba Rajendren; Alfa Dhakal; Pranathi Vadlamani; Jack Townsend; Sarah N Deffit; Heather A Hundley
Journal:  Genome Res       Date:  2020-12-18       Impact factor: 9.043

  6 in total

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