Literature DB >> 27256364

Gene correction in patient-specific iPSCs for therapy development and disease modeling.

Yoon-Young Jang1, Zhaohui Ye2.   

Abstract

The discovery that mature cells can be reprogrammed to become pluripotent and the development of engineered endonucleases for enhancing genome editing are two of the most exciting and impactful technology advances in modern medicine and science. Human pluripotent stem cells have the potential to establish new model systems for studying human developmental biology and disease mechanisms. Gene correction in patient-specific iPSCs can also provide a novel source for autologous cell therapy. Although historically challenging, precise genome editing in human iPSCs is becoming more feasible with the development of new genome-editing tools, including ZFNs, TALENs, and CRISPR. iPSCs derived from patients of a variety of diseases have been edited to correct disease-associated mutations and to generate isogenic cell lines. After directed differentiation, many of the corrected iPSCs showed restored functionality and demonstrated their potential in cell replacement therapy. Genome-wide analyses of gene-corrected iPSCs have collectively demonstrated a high fidelity of the engineered endonucleases. Remaining challenges in clinical translation of these technologies include maintaining genome integrity of the iPSC clones and the differentiated cells. Given the rapid advances in genome-editing technologies, gene correction is no longer the bottleneck in developing iPSC-based gene and cell therapies; generating functional and transplantable cell types from iPSCs remains the biggest challenge needing to be addressed by the research field.

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Year:  2016        PMID: 27256364      PMCID: PMC5881117          DOI: 10.1007/s00439-016-1691-5

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  133 in total

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Authors:  Terence R Flotte; Christian Mueller
Journal:  Hum Mol Genet       Date:  2011-04-16       Impact factor: 6.150

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Authors:  Sara Reardon; David Cyranoski
Journal:  Nature       Date:  2014-09-18       Impact factor: 49.962

3.  In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy.

Authors:  Christopher E Nelson; Chady H Hakim; David G Ousterout; Pratiksha I Thakore; Eirik A Moreb; Ruth M Castellanos Rivera; Sarina Madhavan; Xiufang Pan; F Ann Ran; Winston X Yan; Aravind Asokan; Feng Zhang; Dongsheng Duan; Charles A Gersbach
Journal:  Science       Date:  2015-12-31       Impact factor: 47.728

4.  Reprogramming of human somatic cells to pluripotency with defined factors.

Authors:  In-Hyun Park; Rui Zhao; Jason A West; Akiko Yabuuchi; Hongguang Huo; Tan A Ince; Paul H Lerou; M William Lensch; George Q Daley
Journal:  Nature       Date:  2007-12-23       Impact factor: 49.962

5.  Seamless correction of the sickle cell disease mutation of the HBB gene in human induced pluripotent stem cells using TALENs.

Authors:  Ning Sun; Huimin Zhao
Journal:  Biotechnol Bioeng       Date:  2013-08-26       Impact factor: 4.530

6.  Derivation of naive human embryonic stem cells.

Authors:  Carol B Ware; Angelique M Nelson; Brigham Mecham; Jennifer Hesson; Wenyu Zhou; Erica C Jonlin; Antonio J Jimenez-Caliani; Xinxian Deng; Christopher Cavanaugh; Savannah Cook; Paul J Tesar; Jeffrey Okada; Lilyana Margaretha; Henrik Sperber; Michael Choi; C Anthony Blau; Piper M Treuting; R David Hawkins; Vincenzo Cirulli; Hannele Ruohola-Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-12       Impact factor: 11.205

7.  Efficient human iPS cell derivation by a non-integrating plasmid from blood cells with unique epigenetic and gene expression signatures.

Authors:  Bin-Kuan Chou; Prashant Mali; Xiaosong Huang; Zhaohui Ye; Sarah N Dowey; Linda Ms Resar; Chunlin Zou; Y Alex Zhang; Jay Tong; Linzhao Cheng
Journal:  Cell Res       Date:  2011-01-18       Impact factor: 25.617

8.  Targeted gene correction of α1-antitrypsin deficiency in induced pluripotent stem cells.

Authors:  Kosuke Yusa; S Tamir Rashid; Helene Strick-Marchand; Ignacio Varela; Pei-Qi Liu; David E Paschon; Elena Miranda; Adriana Ordóñez; Nicholas R F Hannan; Foad J Rouhani; Sylvie Darche; Graeme Alexander; Stefan J Marciniak; Noemi Fusaki; Mamoru Hasegawa; Michael C Holmes; James P Di Santo; David A Lomas; Allan Bradley; Ludovic Vallier
Journal:  Nature       Date:  2011-10-12       Impact factor: 49.962

9.  Reading frame correction by targeted genome editing restores dystrophin expression in cells from Duchenne muscular dystrophy patients.

Authors:  David G Ousterout; Pablo Perez-Pinera; Pratiksha I Thakore; Ami M Kabadi; Matthew T Brown; Xiaoxia Qin; Olivier Fedrigo; Vincent Mouly; Jacques P Tremblay; Charles A Gersbach
Journal:  Mol Ther       Date:  2013-06-04       Impact factor: 11.454

10.  Seamless gene correction of β-thalassemia mutations in patient-specific iPSCs using CRISPR/Cas9 and piggyBac.

Authors:  Fei Xie; Lin Ye; Judy C Chang; Ashley I Beyer; Jiaming Wang; Marcus O Muench; Yuet Wai Kan
Journal:  Genome Res       Date:  2014-08-05       Impact factor: 9.043

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  16 in total

Review 1.  Human-relevant preclinical in vitro models for studying hepatobiliary development and liver diseases using induced pluripotent stem cells.

Authors:  Pooja Chaudhari; Lipeng Tian; Zhaohui Ye; Yoon-Young Jang
Journal:  Exp Biol Med (Maywood)       Date:  2019-02-26

2.  Biomedical applications of gene editing.

Authors:  Pablo Perez-Pinera; Zheng-Yi Chen
Journal:  Hum Genet       Date:  2016-09       Impact factor: 4.132

Review 3.  Using Patient-Derived Induced Pluripotent Stem Cells to Identify Parkinson's Disease-Relevant Phenotypes.

Authors:  S L Sison; S C Vermilyea; M E Emborg; A D Ebert
Journal:  Curr Neurol Neurosci Rep       Date:  2018-10-04       Impact factor: 5.081

4.  CRISPR/Cas9 gene correction of HbH-CS thalassemia-induced pluripotent stem cells.

Authors:  Xie Yingjun; Xie Yuhuan; Chen Yuchang; Li Dongzhi; Wang Ding; Song Bing; Yang Yi; Lu Dian; Xue Yanting; Xiong Zeyu; Liu Nengqing; Chen Diyu; Sun Xiaofang
Journal:  Ann Hematol       Date:  2019-09-09       Impact factor: 3.673

5.  Molecular, phenotypic, and sample-associated data to describe pluripotent stem cell lines and derivatives.

Authors:  Kenneth Daily; Shannan J Ho Sui; Lynn M Schriml; Phillip J Dexheimer; Nathan Salomonis; Robin Schroll; Stacy Bush; Mehdi Keddache; Christopher Mayhew; Samad Lotia; Thanneer M Perumal; Kristen Dang; Lorena Pantano; Alexander R Pico; Elke Grassman; Diana Nordling; Winston Hide; Antonis K Hatzopoulos; Punam Malik; Jose A Cancelas; Carolyn Lutzko; Bruce J Aronow; Larsson Omberg
Journal:  Sci Data       Date:  2017-03-28       Impact factor: 6.444

6.  Efficient Gene Editing at Major CFTR Mutation Loci.

Authors:  Jinxue Ruan; Hiroyuki Hirai; Dongshan Yang; Linyuan Ma; Xia Hou; Hong Jiang; Hongguang Wei; Carthic Rajagopalan; Hongmei Mou; Guoshun Wang; Jifeng Zhang; Kui Li; Yuqing E Chen; Fei Sun; Jie Xu
Journal:  Mol Ther Nucleic Acids       Date:  2019-02-16       Impact factor: 8.886

Review 7.  Patterns of CRISPR/Cas9 activity in plants, animals and microbes.

Authors:  Luisa Bortesi; Changfu Zhu; Julia Zischewski; Lucia Perez; Ludovic Bassié; Riad Nadi; Giobbe Forni; Sarah Boyd Lade; Erika Soto; Xin Jin; Vicente Medina; Gemma Villorbina; Pilar Muñoz; Gemma Farré; Rainer Fischer; Richard M Twyman; Teresa Capell; Paul Christou; Stefan Schillberg
Journal:  Plant Biotechnol J       Date:  2016-10-11       Impact factor: 9.803

8.  'Cold shock' increases the frequency of homology directed repair gene editing in induced pluripotent stem cells.

Authors:  Q Guo; G Mintier; M Ma-Edmonds; D Storton; X Wang; X Xiao; B Kienzle; D Zhao; John N Feder
Journal:  Sci Rep       Date:  2018-02-01       Impact factor: 4.379

Review 9.  Pipeline for the Generation and Characterization of Transgenic Human Pluripotent Stem Cells Using the CRISPR/Cas9 Technology.

Authors:  Joffrey Mianné; Chloé Bourguignon; Chloé Nguyen Van; Mathieu Fieldès; Amel Nasri; Said Assou; John De Vos
Journal:  Cells       Date:  2020-05-25       Impact factor: 6.600

10.  Establishment of microRNA, transcript and protein regulatory networks in Alport syndrome induced pluripotent stem cells.

Authors:  Wenbiao Chen; Donge Tang; Yong Dai; Hongyan Diao
Journal:  Mol Med Rep       Date:  2018-11-20       Impact factor: 2.952

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