| Literature DB >> 27255555 |
Caroline Ran1, Lovisa Brodin2, Lars Forsgren3, Marie Westerlund4, Mehrafarin Ramezani1, Sandra Gellhaar1, Fengqing Xiang5, Camilla Fardell6, Hans Nissbrandt6, Peter Söderkvist7, Andreas Puschmann8, Emil Ygland9, Lars Olson1, Thomas Willows2, Anders Johansson2, Olof Sydow2, Karin Wirdefeldt10, Dagmar Galter1, Per Svenningsson2, Andrea Carmine Belin11.
Abstract
Several genetic studies have demonstrated an association between mutations in glucocerebrosidase (GBA), originally implicated in Gaucher's disease, and an increased risk of Parkinson's disease (PD). We have investigated the possible involvement of genetic GBA variations in PD in the Swedish population. Three GBA variants, E326K, N370S, and L444P were screened in the largest Swedish Parkinson cohort reported to date; 1625 cases and 2025 control individuals. We found a significant association with high effect size of the rare variant L444P with PD (odds ratio 8.17; 95% confidence interval: 2.51-26.23; p-value = 0.0020) and a significant association of the common variant E326K (odds ratio 1.60; 95% confidence interval: 1.16-2.22; p-value = 0.026). The rare variant N370S showed a trend for association. Most L444P carriers (68%) were found to reside in northern Sweden, which is consistent with a higher prevalence of Gaucher's disease in this part of the country. Our findings support the role of GBA mutations as risk factors for PD and point to lysosomal dysfunction as a mechanism contributing to PD etiology.Entities:
Keywords: GBA; Gaucher's disease; Genetics; Lysosome; α-Synuclein
Mesh:
Substances:
Year: 2016 PMID: 27255555 PMCID: PMC4982543 DOI: 10.1016/j.neurobiolaging.2016.04.022
Source DB: PubMed Journal: Neurobiol Aging ISSN: 0197-4580 Impact factor: 4.673
Demographic data for the Parkinson patients and control populations
| Variable | Gothenburg | Linköping | Lund | Stockholm | Umeå | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| PD | CTRL | PD | CTRL | PD | CTRL | PD | CTRL | PD | CTRL | |
| Individuals, | 171 | 190 | 195 | 366 | 122 | 43 | 528 | 1271 | 609 | 155 |
| Mean age at enrollment, y | 68.2 | 69.1 | 71.4 | 70.1 | 69.9 | 67.9 | 67.4 | 71.6 | 68.9 | 64.1 |
| Mean age at diagnosis, y | 59.0 | NA | 63.6 | NA | 61.9 | NA | 58.8 | NA | 62.9 | NA |
| Females, | 74 (43.3) | 120 (63.2) | 74 (38.0) | 185 (50.5) | 48 (37.7) | 27 (62.8) | 193 (36.55) | 631 (49.9) | 225 (36.9) | 77 (49.6) |
| Heredity, | 41 (24.0) | NA | 42 (21.5) | NA | 68 (54.8) | NA | 125 (36.8) | NA | 121 (19.9) | NA |
Heredity was defined as having one or more first, second, or third degree relatives with PD.
Key: CTRL, control subjects; NA, data not applicable; PD, Parkinson's disease.
Calculation based on 355 individuals for whom this information was available.
Calculation based on the 416 individuals for whom this information was available, the remaining 855 controls were blood donors.
Genotype frequencies and test statistics of E326K, N370S, and L444P
| SNP | Genotype | Southern Sweden | Northern Sweden | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CTRL, | PD, | χ2 (df) | OR (CI) | CTRL, | PD, | χ2 (df) | OR (CI) | ||||
| E326K | CC | 1731 (96.65) | 898 (94.83) | 4.93 (1) | 1.57 (1.07–2.32) | 0.081 | 141 (95.92) | 552 (92.93) | NA | 1.79 (0.75–4.29) | 0.78 |
| CT/TT | 59 (3.35) | 48 (5.17) | 6 (4.08) | 42 (7.07) | |||||||
| N370S | TT | 1768 (99.89) | 971 (99.28) | 5.29 (1) | 6.73 (1.32–30.75) | 0.065 | 152 (100) | 595 (99.50) | NA | 1.79 (0.09–34.92) | 1 |
| TC/CC | 2 (0.11) | 7 (0.72) | 0 | 3 (0.50) | |||||||
| L444P | AA | 1812 (99.89) | 971 (98.98) | 10.27 (1) | 9.33 (2.04–42.69) | 0.0039 | 151 (99.34) | 583 (95.89) | NA | 6.49 (0.87–48.28) | 0.13 |
| AG/GG | 2 (0.11) | 10 (1.02) | 1 (0.66) | 25 (4.11) | |||||||
Southern Sweden comprises the geographic areas of Stockholm, Gothenburg, Linköping, and Lund; Northern Sweden comprises samples collected at Umeå University Hospital.
Key: CI, 95% confidence interval; CTRL, control individuals; df, degrees of freedom; NA, not applicable; OR, odds ratio; pc-value, p-value after Bonferroni correction for multiple testing; PD, Parkinson's disease; SNP, single nucleotide polymorphism.
Meta-analysis of the southern and northern Swedish populations
| SNP | Pooled OR | 95% CI | Q | I2 | |
|---|---|---|---|---|---|
| E326K | 0.026 | 1.60 | 1.16–2.22 | 0.99 | 0.00 |
| N370S | 0.068 | 5.04 | 1.10–23.04 | 0.41 | 0.00 |
| L444P | 0.0020 | 8.17 | 2.51–26.63 | 0.77 | 0.00 |
Key: 95% CI, 95% confidence interval; I2, I2 heterogeneity index; OR, random-effects meta-analysis odds ratio; pc-value, random-effects meta-analysis p-value with Bonferroni correction for multiple testing; Q, p-value for Cochran's Q statistic; SNP, single nucleotide polymorphism.
Characteristics of PD patients with GBA mutations
| Genotype | Origin | Gender | Heredity | Age, y | Age at onset, y | Disease duration, y | Hoehn and Yahr | Cognitive decline |
|---|---|---|---|---|---|---|---|---|
| N370S +/+ | Gothenburg | F | N | 69 | 66 | 3 | NA | N |
| N370S +/− | Gothenburg | F | N | 66 | 54 | 12 | NA | NA |
| N370S +/− | Linköping | M | Y | 74 | 68 | 6 | NA | NA |
| N370S +/− | Lund | F | N | 79 | 70 | 9 | 5 | Y |
| N370S +/− | Stockholm | F | N | 56 | 45 | 11 | 3 | NA |
| N370S +/− | Stockholm | M | N | 80 | 78 | 2 | 4 | NA |
| N370S +/− | Stockholm | F | N | 86 | 85 | 1 | 3 | NA |
| N370S +/− | Umeå | M | N | 47 | 43 | 4 | 2 | N |
| N370S +/− | Umeå | M | N | 71 | 61 | 9 | 2 | N |
| N370S +/− | Umeå | M | N | 71 | 66 | 4 | 3 | Y |
| L444P +/−, E326K +/− | Gothenburg | M | N | 66 | 55 | 11 | NA | NA |
| L444P +/− | Gothenburg | M | N | 61 | 61 | 1 | NA | NA |
| L444P +/− | Gothenburg | M | Y | 76 | 67 | 9 | NA | NA |
| L444P +/− | Gothenburg | F | Y | 60 | 52 | 8 | NA | NA |
| L444P +/− | Lund | F | N | 64 | 57 | 7 | 3 | Y |
| L444P +/− | Lund | M | Y | 63 | 68 | 5 | 3 | Y |
| L444P +/− | Stockholm | F | N | 64 | 50 | 14 | 2 | NA |
| L444P +/− | Stockholm | M | N | 54 | 50 | 4 | 2 | NA |
| L444P +/− | Stockholm | F | Y | 76 | 75 | 1 | NA | N |
| L444P +/− | Stockholm | M | N | 83 | 73 | 10 | 1 | N |
| L444P +/− | Umeå | M | N | 59 | 43 | 16 | 4 | Y |
| L444P +/− | Umeå | M | Y | 67 | 65 | 2 | 2 | N |
| L444P +/− | Umeå | M | N | 44 | 40 | 4 | 2 | N |
| L444P +/− | Umeå | F | N | 72 | 65 | 7 | 3 | Y |
| L444P +/− | Umeå | F | N | 66 | 63 | 3 | 3 | N |
| L444P +/− | Umeå | F | N | 59 | 48 | 10 | 3 | N |
| L444P +/− | Umeå | M | Y | 55 | 41 | 13 | 4 | N |
| L444P +/− | Umeå | M | N | 55 | 42 | 13 | 2 | N |
| L444P +/− | Umeå | M | Y | 48 | 46 | 2 | 2 | N |
| L444P +/− | Umeå | F | N | 52 | 41 | 10 | 2 | N |
| L444P +/− | Umeå | F | N | 58 | 52 | 5 | 2 | N |
| L444P +/− | Umeå | M | N | 62 | 61 | 1 | 2 | N |
| L444P +/− | Umeå | M | Y | 47 | 41 | 6 | 2 | N |
| L444P +/− | Umeå | F | N | 54 | 53 | 2 | 1.5 | N |
| L444P +/− | Umeå | F | Y | 75 | 72 | 3 | 2 | N |
| L444P +/− | Umeå | F | N | 58 | 49 | 8 | 2.5 | N |
| L444P +/− | Umeå | F | N | 67 | 57 | 9 | 2.5 | N |
| L444P +/− | Umeå | F | Y | 62 | 50 | 11 | 3 | Y |
| L444P +/− | Umeå | M | N | 59 | 61 | 2 | 2 | N |
| L444P +/− | Umeå | F | N | 61 | 62 | 1 | 2 | N |
| L444P +/− | Umeå | F | N | 47 | 43 | 3 | 2 | N |
| L444P +/− | Umeå | F | Y | 62 | 45 | 16 | 3 | N |
| L444P +/− | Umeå | M | Y | 65 | 55 | 10 | 2 | N |
| L444P +/− | Umeå | M | N | 83 | 80 | 2 | 2 | N |
| L444P +/− | Umeå | M | N | 71 | 68 | 2 | 2 | N |
Key: F, female; GBA, glucocerebrosidase; M, male; N, no; NA, data not available; PD, Parkinson's disease; Y, yes.