Literature DB >> 27247414

How to tune an enhancer.

Scott Barolo1.   

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Year:  2016        PMID: 27247414      PMCID: PMC4988584          DOI: 10.1073/pnas.1606109113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


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  20 in total

1.  Neural tissue in ascidian embryos is induced by FGF9/16/20, acting via a combination of maternal GATA and Ets transcription factors.

Authors:  Vincent Bertrand; Clare Hudson; Danielle Caillol; Cornel Popovici; Patrick Lemaire
Journal:  Cell       Date:  2003-11-26       Impact factor: 41.582

2.  Low-affinity transcription factor binding sites shape morphogen responses and enhancer evolution.

Authors:  Andrea I Ramos; Scott Barolo
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-11-11       Impact factor: 6.237

3.  Rapid evolutionary rewiring of a structurally constrained eye enhancer.

Authors:  Christina I Swanson; David B Schwimmer; Scott Barolo
Journal:  Curr Biol       Date:  2011-07-07       Impact factor: 10.834

4.  Determination of spatial domains of zygotic gene expression in the Drosophila embryo by the affinity of binding sites for the bicoid morphogen.

Authors:  W Driever; G Thoma; C Nüsslein-Volhard
Journal:  Nature       Date:  1989-08-03       Impact factor: 49.962

5.  Syntax compensates for poor binding sites to encode tissue specificity of developmental enhancers.

Authors:  Emma K Farley; Katrina M Olson; Wei Zhang; Daniel S Rokhsar; Michael S Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-06       Impact factor: 11.205

6.  Binding affinities and cooperative interactions with bHLH activators delimit threshold responses to the dorsal gradient morphogen.

Authors:  J Jiang; M Levine
Journal:  Cell       Date:  1993-03-12       Impact factor: 41.582

Review 7.  The grammar of transcriptional regulation.

Authors:  Shira Weingarten-Gabbay; Eran Segal
Journal:  Hum Genet       Date:  2014-01-05       Impact factor: 4.132

8.  Structural rules and complex regulatory circuitry constrain expression of a Notch- and EGFR-regulated eye enhancer.

Authors:  Christina I Swanson; Nicole C Evans; Scott Barolo
Journal:  Dev Cell       Date:  2010-03-16       Impact factor: 12.270

9.  Conservation and regulatory associations of a wide affinity range of mouse transcription factor binding sites.

Authors:  Savina A Jaeger; Esther T Chan; Michael F Berger; Rolf Stottmann; Timothy R Hughes; Martha L Bulyk
Journal:  Genomics       Date:  2010-01-15       Impact factor: 5.736

Review 10.  Looping back to leap forward: transcription enters a new era.

Authors:  Michael Levine; Claudia Cattoglio; Robert Tjian
Journal:  Cell       Date:  2014-03-27       Impact factor: 41.582

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  6 in total

1.  From Influenza Virus Infections to Lupus: Synchronous Estrogen Receptor α and RNA Polymerase II Binding Within the Immunoglobulin Heavy Chain Locus.

Authors:  Bart G Jones; Robert E Sealy; Rhiannon R Penkert; Sherri L Surman; Barbara K Birshtein; Beisi Xu; Geoffrey Neale; Robert W Maul; Patricia J Gearhart; Julia L Hurwitz
Journal:  Viral Immunol       Date:  2020-02-27       Impact factor: 2.257

2.  DNA Sequence Constraints Define Functionally Active Steroid Nuclear Receptor Binding Sites in Chromatin.

Authors:  Laurel A Coons; Sylvia C Hewitt; Adam B Burkholder; Donald P McDonnell; Kenneth S Korach
Journal:  Endocrinology       Date:  2017-10-01       Impact factor: 4.736

3.  The Non-continuum Nature of Eukaryotic Transcriptional Regulation.

Authors:  Gregory M K Poon
Journal:  Adv Exp Med Biol       Date:  2022       Impact factor: 2.622

Review 4.  Enhancer grammar in development, evolution, and disease: dependencies and interplay.

Authors:  Granton A Jindal; Emma K Farley
Journal:  Dev Cell       Date:  2021-03-08       Impact factor: 12.270

5.  Mutational analysis of a Drosophila neuroblast enhancer governing nubbin expression during CNS development.

Authors:  Jermaine Ross; Alexander Kuzin; Thomas Brody; Ward F Odenwald
Journal:  Genesis       Date:  2018-08-18       Impact factor: 2.487

Review 6.  Nuclear Receptors, Ligands and the Mammalian B Cell.

Authors:  Bart G Jones; Rhiannon R Penkert; Sherri L Surman; Robert E Sealy; Julia L Hurwitz
Journal:  Int J Mol Sci       Date:  2020-07-15       Impact factor: 5.923

  6 in total

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