| Literature DB >> 27242401 |
Sunday M Francis1, Emily Kistner-Griffin2, Zhongyu Yan3, Stephen Guter4, Edwin H Cook4, Suma Jacob1.
Abstract
BACKGROUND: There has been increasing interest in oxytocin (peptide: OT, gene: OXT) as a treatment pathway for neurodevelopmental disorders such as Autism Spectrum Disorder (ASD). Neurodevelopmental disorders affect functional, social, and intellectual abilities. With advances in molecular biology, research has connected multiple gene regions to the clinical presentation of ASD. Studies have also shown that the neuropeptide hormones OT and arginine vasopressin (AVP) influence mammalian social and territorial behaviors and may have treatment potential for neurodevelopmental disorders. Published data examining molecular and phenotypic variation in ASD, such as cognitive abilities, are limited. Since most studies have focused on the receptors in the OT-AVP system, we investigated genetic variation within peptide genes for association with phenotypic ASD features that help identify subgroups within the spectrum.Entities:
Keywords: ASD; IQ; biomarkers; genetics; oxytocin; phenotypes; polymorphisms; vasopressin
Year: 2016 PMID: 27242401 PMCID: PMC4863894 DOI: 10.3389/fnins.2016.00195
Source DB: PubMed Journal: Front Neurosci ISSN: 1662-453X Impact factor: 4.677
Demographic description of the entire genotyped sample and the genotyped European Ancestry (EA) subsample.
| Number Genotyped | 207 | 108 |
| Average Age (years) | 9.88 (±5.48 SD) | 9.82 (±5.99 SD) |
| Sex | 170 (82.1% male) | 91 (84.3% male) |
| 37 (17.9% female) | 17 (15.7% female) | |
| Full-Scale IQ | 79.9 ( | 83.9 ( |
| Verbal IQ | 77.5 ( | 83.6 ( |
| Non-verbal IQ | 82.1 ( | 85.5 ( |
The EA subsample utilized in the biomarker analysis was pulled from the original, full dataset.
Figure 1Schematic of neurohormone genes, . Located on chromosome 20, OXT and AVP are closely positioned and in opposite transcriptional orientations. The SNPs listed are the 10 genotyped SNPs utilized in this study. The bolded SNPs denote the SNPs used in the haplotype.
Haplotype associations in the entire sample.
| IQ Difference | rs6084258 | rs4813625 | rs877172 | rs6133010 | G | C | G | A | 0.040 | Additive | 2.06 |
| rs6084258 | rs4813625 | rs877172 | G | C | G | 0.040 | Additive | 2.06 | |||
| rs4813625 | rs877172 | rs6133010 | C | G | A | 0.040 | Additive | 2.06 | |||
| VIQ | rs4813625 | rs877172 | rs6133010 | C | T | A | 0.045 | Dominant | −2.00 | ||
| ABC—Social Withdrawal | rs6084258 | rs4813625 | rs877172 | rs6133010 | G | G | G | A | 0.015 | Additive | 2.43 |
| rs6084258 | rs4813625 | rs877172 | G | G | G | 0.015 | Additive | 2.43 | |||
| G | G | T | 0.050 | Dominant | 1.96 | ||||||
| rs6084258 | rs4813625 | rs6133010 | G | G | A | 0.003 | Additive | 3.01 | |||
| rs6084258 | rs4813625 | G | G | 0.002 | Additive | 3.08 | |||||
| rs6084258 | rs6133010 | G | A | 0.013 | Additive | 2.49 | |||||
| rs4813625 | rs877172 | rs6133010 | G | G | A | 0.015 | Additive | 2.44 | |||
| rs4813625 | rs6133010 | G | A | 0.001 | Additive | 3.38 | |||||
| C | A | 0.028 | Additive | −2.20 | |||||||
| SRS Total | rs6084258 | rs4813625 | G | C | 0.046 | Additive | −2.00 | ||||
Haplotypes created from four SNPs in the 5′ region of OXT were analyzed for associations with ASD diagnosis, quantitative phenotypes, and biomarkers. Analysis was performed on the entire sample (shown) and an EA subsample (not shown). Each row lists a significant haplotype for each phenotype tested. Two specific combinations of markers, rs6084258-rs4813625-rs877172 and rs4813625-rs6133010, had more than one significant haplotype for ABC—Social Withdrawal.
Significant SNPs from eQTL analysis.
| rs8184236 | CDC25B | 0.0043 | cis |
| C20orf96 | 0.0042 | cis | |
| rs2326055 | NOP56 | 0.0086 | cis |
| SNORD57 | 0.0077 | cis | |
| PANK2 | 0.0084 | cis | |
| rs11087565 | RASSF2 | 0.0097 | cis |
| rs6076466 | TCF15 | 0.0062 | cis |
| RNF24 | 0.0052 | cis | |
| rs8184236 | LRRN4 | 0.005855 | cis |
| rs6076466 | |||
| GFRA4 | 0.0004464 | cis | |
| rs4815566 | TMC2 | 0.003158 | cis |
| CRLS1 | 0.0007546 | cis | |
| rs2326055 | RBCK1 | 0.004095 | cis |
| C20orf96 | 0.002497 | cis | |
Genotyped variants displayed a low level of association with gene expression in the parietal lobe and cerebellum. The bolded SNP denotes the most significant association found in our analysis.
| Diagnosis | ASD | OXT rs6084258 | 0.001 | Dominant | −3.30 | G | A |
| IQ | FSIQ | OXT rs6133010 | 0.008 | Dominant | −2.63 | A | A |
| NVIQ | OXT rs6133010 | 0.010 | Dominant | −2.59 | A | A | |
| VIQ | OXT rs6133010 | 0.006 | Dominant | −2.78 | A | A | |
| Restricted/Repetitive Behaviors | ADOS—RRB | OXT-AVP rs2740204 | 0.036 | Dominant | 2.10 | T | T |
| 0.022 | Additive | 2.30 | T | T | |||
| Social Communications | ABC—Social Withdrawal | OXT rs4813625 | 0.001 | Dominant | −3.25 | C | G |
| 0.001 | Additive | −3.41 | C | G | |||
| ABC—Inappropriate Speech | OXT-AVP rs1410713 | 0.021 | Dominant | 2.31 | A | A | |
| 0.036 | Additive | 2.09 | A | A | |||
| WB5HT (z-score) | OXT rs4813625 | 0.027 | Dominant | 2.21 | C | C |
| OXT rs877172 | 0.033 | Dominant | 2.14 | T | T | |
| Plasma OT | OXT rs6084258 | 0.011 | Dominant | −2.54 | G | G |
| OXT rs11697250 | 0.010 | Dominant | −2.57 | A | A | |
| 0.039 | Additive | −2.06 | A | A | ||
| OXT rs877172 | 0.002 | Dominant | −3.17 | G | G | |
| 0.005 | Additive | −2.82 | G | G | ||
The OXT SNPs are located in the 5′ region of OXT and the OXT-AVP SNPs are located in the 3′ region between the two genes. SNPs in these areas have been shown to be associated with ASD-related phenotypes in other studies. (A) summarizes the significant associations between tagged SNPs and ASD diagnosis and measured assessments in the entire sample. (B) displays the significant SNPs from the biomarker (WB5HTz, pOT) analyses in an EA subsample (WB5HT: N ≤ 108; pOT: N ≤ 38). Boxplots have been submitted as supplementary figures, to provide graphical detail about the associations between the significant SNPs and WB5HT (Supplementary Figures 1A–D) and pOT (Supplementary Figures 2A–F).