Literature DB >> 27234838

Molecular perspectives and recent advances in microbial remediation of persistent organic pollutants.

Jaya Chakraborty1, Surajit Das2.   

Abstract

Nutrition and pollution stress stimulate genetic adaptation in microorganisms and assist in evolution of diverse metabolic pathways for their survival on several complex organic compounds. Persistent organic pollutants (POPs) are highly lipophilic in nature and cause adverse effects to the environment and human health by biomagnification through the food chain. Diverse microorganisms, harboring numerous plasmids and catabolic genes, acclimatize to these environmentally unfavorable conditions by gene duplication, mutational drift, hypermutation, and recombination. Genetic aspects of some major POP catabolic genes such as biphenyl dioxygenase (bph), DDT 2,3-dioxygenase, and angular dioxygenase assist in degradation of biphenyl, organochlorine pesticides, and dioxins/furans, respectively. Microbial metagenome constitutes the largest genetic reservoir with miscellaneous enzymatic activities implicated in degradation. To tap the metabolic potential of microorganisms, recent techniques like sequence and function-based screening and substrate-induced gene expression are proficient in tracing out novel catabolic genes from the entire metagenome for utilization in enhanced biodegradation. The major endeavor of today's scientific world is to characterize the exact genetic mechanisms of microbes for bioremediation of these toxic compounds by excavating into the uncultured plethora. This review entails the effect of POPs on the environment and involvement of microbial catabolic genes for their removal with the advanced techniques of bioremediation.

Entities:  

Keywords:  Adaptation; Bioremediation; Catabolic genes; Metagenome; Persistent organic pollutants

Mesh:

Substances:

Year:  2016        PMID: 27234838     DOI: 10.1007/s11356-016-6887-7

Source DB:  PubMed          Journal:  Environ Sci Pollut Res Int        ISSN: 0944-1344            Impact factor:   4.223


  175 in total

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Authors:  M Bunge; H Ballerstedt; U Lechner
Journal:  Chemosphere       Date:  2001 May-Jun       Impact factor: 7.086

Review 2.  Coupling microbial catabolic actions with abiotic redox processes: a new recipe for persistent organic pollutant (POP) removal.

Authors:  Jong-Rok Jeon; Kumarasamy Murugesan; In-Hyun Nam; Yoon-Seok Chang
Journal:  Biotechnol Adv       Date:  2012-11-12       Impact factor: 14.227

3.  Oxidation of persistent environmental pollutants by a white rot fungus.

Authors:  J A Bumpus; M Tien; D Wright; S D Aust
Journal:  Science       Date:  1985-06-21       Impact factor: 47.728

4.  Histological and ultrastructural evidence for zinc sequestration in Solanum nigrum L.

Authors:  Kalina A Samardjieva; Fernando Tavares; José Pissarra
Journal:  Protoplasma       Date:  2014-08-14       Impact factor: 3.356

5.  Cloning and characterisation of a novel 2,4-dichlorophenol hydroxylase from a metagenomic library derived from polychlorinated biphenyl-contaminated soil.

Authors:  Yang Lu; Ying Yu; Rui Zhou; Wei Sun; Chunyan Dai; Pei Wan; Lanying Zhang; Dongyun Hao; Hejun Ren
Journal:  Biotechnol Lett       Date:  2011-02-04       Impact factor: 2.461

6.  Isolation and characterization of dibenzofuran-degrading bacteria.

Authors:  Kazumasa Fukuda; Sumio Nagata; Hatsumi Taniguchi
Journal:  FEMS Microbiol Lett       Date:  2002-03-05       Impact factor: 2.742

7.  Characterization of chlordecone-tolerant fungal populations isolated from long-term polluted tropical volcanic soil in the French West Indies.

Authors:  Chloé Merlin; Marion Devers; Olivier Crouzet; Cécile Heraud; Christian Steinberg; Christian Mougin; Fabrice Martin-Laurent
Journal:  Environ Sci Pollut Res Int       Date:  2013-07-20       Impact factor: 4.223

Review 8.  Metagenomics and novel gene discovery: promise and potential for novel therapeutics.

Authors:  Eamonn P Culligan; Roy D Sleator; Julian R Marchesi; Colin Hill
Journal:  Virulence       Date:  2013-04-01       Impact factor: 5.882

9.  A culture-independent approach to unravel uncultured bacteria and functional genes in a complex microbial community.

Authors:  Yun Wang; Yin Chen; Qian Zhou; Shi Huang; Kang Ning; Jian Xu; Robert M Kalin; Stephen Rolfe; Wei E Huang
Journal:  PLoS One       Date:  2012-10-17       Impact factor: 3.240

10.  New hydrocarbon degradation pathways in the microbial metagenome from Brazilian petroleum reservoirs.

Authors:  Isabel Natalia Sierra-García; Javier Correa Alvarez; Suzan Pantaroto de Vasconcellos; Anete Pereira de Souza; Eugenio Vaz dos Santos Neto; Valéria Maia de Oliveira
Journal:  PLoS One       Date:  2014-02-26       Impact factor: 3.240

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  8 in total

1.  Adaptive Responses of Shewanella decolorationis to Toxic Organic Extracellular Electron Acceptor Azo Dyes in Anaerobic Respiration.

Authors:  Yun Fang; Jun Liu; Guannan Kong; Xueduan Liu; Yonggang Yang; Enze Li; Xingjuan Chen; Da Song; Xuejiao You; Guoping Sun; Jun Guo; Meiying Xu
Journal:  Appl Environ Microbiol       Date:  2019-08-01       Impact factor: 4.792

2.  Biochemical activity of soil contaminated with BPS, bioaugmented with a mould fungi consortium and a bacteria consortium.

Authors:  Magdalena Zaborowska; Jadwiga Wyszkowska; Jan Kucharski
Journal:  Environ Sci Pollut Res Int       Date:  2019-11-19       Impact factor: 4.223

Review 3.  Microbial debromination of hexabromocyclododecanes.

Authors:  Fei Yu; Yuyang Li; Hui Wang; Tao Peng; Yi-Rui Wu; Zhong Hu
Journal:  Appl Microbiol Biotechnol       Date:  2021-06-02       Impact factor: 4.813

4.  Biochemical strategies for the detection and detoxification of toxic chemicals in the environment.

Authors:  Ferdinando Febbraio
Journal:  World J Biol Chem       Date:  2017-02-26

5.  Bacterial communities in natural versus pesticide-treated Aphis gossypii populations in North China.

Authors:  Shuai Zhang; Junyu Luo; Li Wang; Lijuan Zhang; Xiangzhen Zhu; Weili Jiang; Jinjie Cui
Journal:  Microbiologyopen       Date:  2018-06-07       Impact factor: 3.139

6.  Recent Advanced Technologies for the Characterization of Xenobiotic-Degrading Microorganisms and Microbial Communities.

Authors:  Sandhya Mishra; Ziqiu Lin; Shimei Pang; Wenping Zhang; Pankaj Bhatt; Shaohua Chen
Journal:  Front Bioeng Biotechnol       Date:  2021-02-10

7.  Comparative Genomic Analysis of Antarctic Pseudomonas Isolates with 2,4,6-Trinitrotoluene Transformation Capabilities Reveals Their Unique Features for Xenobiotics Degradation.

Authors:  Ma Ángeles Cabrera; Sebastián L Márquez; José M Pérez-Donoso
Journal:  Genes (Basel)       Date:  2022-07-28       Impact factor: 4.141

8.  Diversity and Dynamics of Microbial Community Structure in Different Mangrove, Marine and Freshwater Sediments During Anaerobic Debromination of PBDEs.

Authors:  Ya Fen Wang; Hao Wen Zhu; Ying Wang; Xiang Ling Zhang; Nora Fung Yee Tam
Journal:  Front Microbiol       Date:  2018-05-15       Impact factor: 5.640

  8 in total

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