Literature DB >> 27233797

Native plasmids restrict growth of Phaeobacter inhibens DSM 17395: Energetic costs of plasmids assessed by quantitative physiological analyses.

Kathleen Trautwein1, Sabine Eva Will2, Reiner Hulsch1, Uwe Maschmann1, Katharina Wiegmann1, Michael Hensler2, Victoria Michael3, Hanna Ruppersberg1, Daniel Wünsch1, Christoph Feenders4, Meina Neumann-Schaal2, Sabine Kaltenhäuser2, Marcus Ulbrich2, Kerstin Schmidt-Hohagen2, Bernd Blasius4, Jörn Petersen3, Dietmar Schomburg2, Ralf Rabus1.   

Abstract

Plasmid carriage is associated with energetic costs, and thus only those plasmids providing fitness benefits are stably maintained in the host lineage. Marine bacteria of the Roseobacter clade harbor up to 11 extrachromosomal replicons, adding lifestyle-relevant and possibly habitat success-promoting functions to their genomic repertoire. Phaeobacter inhibens DSM 17395 is a nutritionally versatile representative, carrying three stable and functionally distinct plasmids (65, 78, and 262 kb). The present study investigates the physiological and energetic consequences of plasmid carriage in P. inhibens DSM 17395, employing mutants cured from all native plasmids in every possible combination (seven different). Cultivation in process-controlled bioreactors with casamino acids as organic substrate revealed a complex physiological response, suggesting existence of functional interconnections between the replicons. Deletion of the 262 kb plasmid boosted growth rate (>3-fold) and growth efficiency (yields for carbon, O2 and CO2 ), which was not observed for the 65 or 78 kb plasmid. Carriage of the 262 kb plasmid was most costly for the wild type, i.e. contributing ∼50% to its energetic (dissimilatory) expenditures. Cost-benefit analysis of plasmid carriage reflects the high value of plasmids for niche specialization of P. inhibens DSM 17395 and most likely also for related Phaeobacter species.
© 2016 Society for Applied Microbiology and John Wiley & Sons Ltd.

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Year:  2016        PMID: 27233797     DOI: 10.1111/1462-2920.13381

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  17 in total

1.  Non-Redfield, nutrient synergy and flexible internal elemental stoichiometry in a marine bacterium.

Authors:  Kathleen Trautwein; Christoph Feenders; Reiner Hulsch; Hanna S Ruppersberg; Annemieke Strijkstra; Mirjam Kant; Jannes Vagts; Daniel Wünsch; Bernhard Michalke; Michael Maczka; Stefan Schulz; Helmut Hillebrand; Bernd Blasius; Ralf Rabus
Journal:  FEMS Microbiol Ecol       Date:  2017-05-01       Impact factor: 4.194

2.  Amino Acid and Sugar Catabolism in the Marine Bacterium Phaeobacter inhibens DSM 17395 from an Energetic Viewpoint.

Authors:  Daniel Wünsch; Kathleen Trautwein; Sabine Scheve; Christina Hinrichs; Christoph Feenders; Bernd Blasius; Dietmar Schomburg; Ralf Rabus
Journal:  Appl Environ Microbiol       Date:  2019-11-27       Impact factor: 4.792

3.  The marine bacterium Phaeobacter inhibens secures external ammonium by rapid buildup of intracellular nitrogen stocks.

Authors:  Kathleen Trautwein; Michael Hensler; Katharina Wiegmann; Ekaterina Skorubskaya; Lars Wöhlbrand; Daniel Wünsch; Christina Hinrichs; Christoph Feenders; Constanze Müller; Kristina Schell; Hanna Ruppersberg; Jannes Vagts; Sebastian Koßmehl; Alexander Steinbüchel; Philippe Schmidt-Kopplin; Heinz Wilkes; Helmut Hillebrand; Bernd Blasius; Dietmar Schomburg; Ralf Rabus
Journal:  FEMS Microbiol Ecol       Date:  2018-10-01       Impact factor: 4.194

4.  Impact of Quorum Sensing and Tropodithietic Acid Production on the Exometabolome of Phaeobacter inhibens.

Authors:  Sujatha Srinivas; Martine Berger; Thorsten Brinkhoff; Jutta Niggemann
Journal:  Front Microbiol       Date:  2022-06-21       Impact factor: 6.064

5.  Key Impact of an Uncommon Plasmid on Bacillus amyloliquefaciens subsp. plantarum S499 Developmental Traits and Lipopeptide Production.

Authors:  Giulia Molinatto; Laurent Franzil; Sébastien Steels; Gerardo Puopolo; Ilaria Pertot; Marc Ongena
Journal:  Front Microbiol       Date:  2017-01-19       Impact factor: 5.640

6.  The limits to growth - energetic burden of the endogenous antibiotic tropodithietic acid in Phaeobacter inhibens DSM 17395.

Authors:  Sabine Eva Will; Meina Neumann-Schaal; Raymond Leopold Heydorn; Pascal Bartling; Jörn Petersen; Dietmar Schomburg
Journal:  PLoS One       Date:  2017-05-08       Impact factor: 3.240

7.  Clostridioides difficile 630Δerm in silico and in vivo - quantitative growth and extensive polysaccharide secretion.

Authors:  Henning Dannheim; Sabine E Will; Dietmar Schomburg; Meina Neumann-Schaal
Journal:  FEBS Open Bio       Date:  2017-03-09       Impact factor: 2.693

8.  Genomic Evolution of the Marine Bacterium Phaeobacter inhibens during Biofilm Growth.

Authors:  Torsten Thomas; Suhelen Egan; Marwan E Majzoub; Kerensa McElroy; Michael Maczka; Stefan Schulz
Journal:  Appl Environ Microbiol       Date:  2021-09-10       Impact factor: 4.792

9.  The fate of lysine: Non-targeted stable isotope analysis reveals parallel ways for lysine catabolization in Phaeobacter inhibens.

Authors:  Lorenz C Reimer; Sabine E Will; Dietmar Schomburg
Journal:  PLoS One       Date:  2017-10-23       Impact factor: 3.240

10.  Metabolic Reprogramming of Clostridioides difficile During the Stationary Phase With the Induction of Toxin Production.

Authors:  Julia D Hofmann; Andreas Otto; Mareike Berges; Rebekka Biedendieck; Annika-Marisa Michel; Dörte Becher; Dieter Jahn; Meina Neumann-Schaal
Journal:  Front Microbiol       Date:  2018-08-21       Impact factor: 5.640

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