Literature DB >> 27230683

The history of the Y chromosome in man.

Jennifer F Hughes1, David C Page2.   

Abstract

Studies of the Y chromosome over the past few decades have opened a window into the history of our species, through the reconstruction and exploitation of a patrilineal (Y-genealogical) tree based on several hundred single-nucleotide variants (SNVs). A new study validates, refines and extends this tree by incorporating >65,000 Y-linked variants identified in 1,244 men representing worldwide diversity.

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Mesh：

Year:  2016        PMID： 27230683     DOI： 10.1038/ng.3580

Source DB:  PubMed          Journal:  Nat Genet        ISSN： 1061-4036            Impact factor:   38.330


  11 in total

1.  A nomenclature system for the tree of human Y-chromosomal binary haplogroups.

Authors: 
Journal:  Genome Res       Date:  2002-02       Impact factor: 9.043

2.  The genetic legacy of the Mongols.

Authors:  Tatiana Zerjal; Yali Xue; Giorgio Bertorelle; R Spencer Wells; Weidong Bao; Suling Zhu; Raheel Qamar; Qasim Ayub; Aisha Mohyuddin; Songbin Fu; Pu Li; Nadira Yuldasheva; Ruslan Ruzibakiev; Jiujin Xu; Qunfang Shu; Ruofu Du; Huanming Yang; Matthew E Hurles; Elizabeth Robinson; Tudevdagva Gerelsaikhan; Bumbein Dashnyam; S Qasim Mehdi; Chris Tyler-Smith
Journal:  Am J Hum Genet       Date:  2003-01-17       Impact factor: 11.025

Review 3.  The human Y chromosome: an evolutionary marker comes of age.

Authors:  Mark A Jobling; Chris Tyler-Smith
Journal:  Nat Rev Genet       Date:  2003-08       Impact factor: 53.242

4.  Y-chromosome descent clusters and male differential reproductive success: young lineage expansions dominate Asian pastoral nomadic populations.

Authors:  Patricia Balaresque; Nicolas Poulet; Sylvain Cussat-Blanc; Patrice Gerard; Lluis Quintana-Murci; Evelyne Heyer; Mark A Jobling
Journal:  Eur J Hum Genet       Date:  2015-01-14       Impact factor: 4.246

Review 5.  Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences.

Authors:  G David Poznik; Yali Xue; Fernando L Mendez; Thomas F Willems; Andrea Massaia; Melissa A Wilson Sayres; Qasim Ayub; Shane A McCarthy; Apurva Narechania; Seva Kashin; Yuan Chen; Ruby Banerjee; Juan L Rodriguez-Flores; Maria Cerezo; Haojing Shao; Melissa Gymrek; Ankit Malhotra; Sandra Louzada; Rob Desalle; Graham R S Ritchie; Eliza Cerveira; Tomas W Fitzgerald; Erik Garrison; Anthony Marcketta; David Mittelman; Mallory Romanovitch; Chengsheng Zhang; Xiangqun Zheng-Bradley; Gonçalo R Abecasis; Steven A McCarroll; Paul Flicek; Peter A Underhill; Lachlan Coin; Daniel R Zerbino; Fengtang Yang; Charles Lee; Laura Clarke; Adam Auton; Yaniv Erlich; Robert E Handsaker; Carlos D Bustamante; Chris Tyler-Smith
Journal:  Nat Genet       Date:  2016-04-25       Impact factor: 38.330

6.  Sequencing Y chromosomes resolves discrepancy in time to common ancestor of males versus females.

Authors:  G David Poznik; Brenna M Henn; Muh-Ching Yee; Elzbieta Sliwerska; Ghia M Euskirchen; Alice A Lin; Michael Snyder; Lluis Quintana-Murci; Jeffrey M Kidd; Peter A Underhill; Carlos D Bustamante
Journal:  Science       Date:  2013-08-02       Impact factor: 47.728

7.  Y chromosome sequence variation and the history of human populations.

Authors:  P A Underhill; P Shen; A A Lin; L Jin; G Passarino; W H Yang; E Kauffman; B Bonné-Tamir; J Bertranpetit; P Francalacci; M Ibrahim; T Jenkins; J R Kidd; S Q Mehdi; M T Seielstad; R S Wells; A Piazza; R W Davis; M W Feldman; L L Cavalli-Sforza; P J Oefner
Journal:  Nat Genet       Date:  2000-11       Impact factor: 38.330

8.  A calibrated human Y-chromosomal phylogeny based on resequencing.

Authors:  Wei Wei; Qasim Ayub; Yuan Chen; Shane McCarthy; Yiping Hou; Ignazio Carbone; Yali Xue; Chris Tyler-Smith
Journal:  Genome Res       Date:  2012-10-04       Impact factor: 9.043

9.  The Y-chromosome tree bursts into leaf: 13,000 high-confidence SNPs covering the majority of known clades.

Authors:  Pille Hallast; Chiara Batini; Daniel Zadik; Pierpaolo Maisano Delser; Jon H Wetton; Eduardo Arroyo-Pardo; Gianpiero L Cavalleri; Peter de Knijff; Giovanni Destro Bisol; Berit Myhre Dupuy; Heidi A Eriksen; Lynn B Jorde; Turi E King; Maarten H Larmuseau; Adolfo López de Munain; Ana M López-Parra; Aphrodite Loutradis; Jelena Milasin; Andrea Novelletto; Horolma Pamjav; Antti Sajantila; Werner Schempp; Matt Sears; Aslıhan Tolun; Chris Tyler-Smith; Anneleen Van Geystelen; Scott Watkins; Bruce Winney; Mark A Jobling
Journal:  Mol Biol Evol       Date:  2014-12-02       Impact factor: 16.240

10.  A global reference for human genetic variation.

Authors:  Adam Auton; Lisa D Brooks; Richard M Durbin; Erik P Garrison; Hyun Min Kang; Jan O Korbel; Jonathan L Marchini; Shane McCarthy; Gil A McVean; Gonçalo R Abecasis
Journal:  Nature       Date:  2015-10-01       Impact factor: 49.962
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  8 in total

Review 1.  The eXceptional nature of the X chromosome.

Authors:  Bradley P Balaton; Thomas Dixon-McDougall; Samantha B Peeters; Carolyn J Brown
Journal:  Hum Mol Genet       Date:  2018-08-01       Impact factor: 6.150

Review 2.  The Y chromosome as the most popular marker in genetic genealogy benefits interdisciplinary research.

Authors:  Francesc Calafell; Maarten H D Larmuseau
Journal:  Hum Genet       Date:  2016-11-05       Impact factor: 4.132

3.  Y Chromosome Genes May Play Roles in the Development of Neural Rosettes from Human Embryonic Stem Cells.

Authors:  Farzaneh Khani; Simin Nafian; Sepideh Mollamohammadi; Shiva Nemati; Bahare Shokoohian; Seyedeh Nafiseh Hassani; Hossein Baharvand; Hamid Reza Soleimanpour-Lichaei; Ghasem Hosseini Salekdeh
Journal:  Stem Cell Rev Rep       Date:  2022-06-03       Impact factor: 5.739

Review 4.  Sex and Liver Disease: The Necessity of an Overarching Theory to Explain the Effect of Sex on Nonreproductive Functions.

Authors:  Adriana Maggi
Journal:  Endocrinology       Date:  2022-01-01       Impact factor: 4.736

5.  Horse Y chromosome assembly displays unique evolutionary features and putative stallion fertility genes.

Authors:  Jan E Janečka; Brian W Davis; Sharmila Ghosh; Nandina Paria; Pranab J Das; Ludovic Orlando; Mikkel Schubert; Martin K Nielsen; Tom A E Stout; Wesley Brashear; Gang Li; Charles D Johnson; Richard P Metz; Al Muatasim Al Zadjali; Charles C Love; Dickson D Varner; Daniel W Bellott; William J Murphy; Bhanu P Chowdhary; Terje Raudsepp
Journal:  Nat Commun       Date:  2018-07-27       Impact factor: 14.919

Review 6.  Battle of the sexes: contrasting roles of testis-specific protein Y-encoded (TSPY) and TSPX in human oncogenesis.

Authors:  Yun-Fai Chris Lau; Yunmin Li; Tatsuo Kido
Journal:  Asian J Androl       Date:  2019 May-Jun       Impact factor: 3.285

7.  Insights Into Forensic Features and Genetic Structures of Guangdong Maoming Han Based on 27 Y-STRs.

Authors:  Haoliang Fan; Qiqian Xie; Yanning Li; Lingxiang Wang; Shao-Qing Wen; Pingming Qiu
Journal:  Front Genet       Date:  2021-06-18       Impact factor: 4.599

Review 8.  Y chromosome in health and diseases.

Authors:  Yun-Fai Chris Lau
Journal:  Cell Biosci       Date:  2020-08-13       Impact factor: 7.133
  8 in total

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