Literature DB >> 27226624

A Native Threonine Coordinates Ordered Water to Tune Light-Oxygen-Voltage (LOV) Domain Photocycle Kinetics and Osmotic Stress Signaling in Trichoderma reesei ENVOY.

Jameela Lokhandwala1, Rafael I Silverman Y de la Vega2, Hilary C Hopkins1, Collin W Britton1, Aroa Rodriguez-Iglesias3, Roberto Bogomolni2, Monika Schmoll3, Brian D Zoltowski4.   

Abstract

Light-oxygen-voltage (LOV) domain-containing proteins function as small light-activated modules capable of imparting blue light control of biological processes. Their small modular nature has made them model proteins for allosteric signal transduction and optogenetic devices. Despite intense research, key aspects of their signal transduction mechanisms and photochemistry remain poorly understood. In particular, ordered water has been identified as a possible key mediator of photocycle kinetics, despite the lack of ordered water in the LOV active site. Herein, we use recent crystal structures of a fungal LOV protein ENVOY to interrogate the role of Thr(101) in recruiting water to the flavin active site where it can function as an intrinsic base to accelerate photocycle kinetics. Kinetic and molecular dynamic simulations confirm a role in solvent recruitment to the active site and identify structural changes that correlate with solvent recruitment. In vivo analysis of T101I indicates a direct role of the Thr(101) position in mediating adaptation to osmotic stress, thereby verifying biological relevance of ordered water in LOV signaling. The combined studies identify position 101 as a mediator of both allostery and photocycle catalysis that can impact organism physiology.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  LOV domain; kinetics; molecular dynamics; optogenetics; osmotic stress; photobiology; structure-function

Mesh:

Substances:

Year:  2016        PMID: 27226624      PMCID: PMC4938200          DOI: 10.1074/jbc.M116.731448

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  59 in total

1.  The LOV domain family: photoresponsive signaling modules coupled to diverse output domains.

Authors:  Sean Crosson; Sudarshan Rajagopal; Keith Moffat
Journal:  Biochemistry       Date:  2003-01-14       Impact factor: 3.162

2.  Structural basis for light-dependent signaling in the dimeric LOV domain of the photosensor YtvA.

Authors:  Andreas Möglich; Keith Moffat
Journal:  J Mol Biol       Date:  2007-08-02       Impact factor: 5.469

3.  GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit.

Authors:  Sander Pronk; Szilárd Páll; Roland Schulz; Per Larsson; Pär Bjelkmar; Rossen Apostolov; Michael R Shirts; Jeremy C Smith; Peter M Kasson; David van der Spoel; Berk Hess; Erik Lindahl
Journal:  Bioinformatics       Date:  2013-02-13       Impact factor: 6.937

4.  ZEITLUPE encodes a novel clock-associated PAS protein from Arabidopsis.

Authors:  D E Somers; T F Schultz; M Milnamow; S A Kay
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

5.  Signaling mechanisms of LOV domains: new insights from molecular dynamics studies.

Authors:  Peter L Freddolino; Kevin H Gardner; Klaus Schulten
Journal:  Photochem Photobiol Sci       Date:  2013-07       Impact factor: 3.982

Review 6.  Higher plants use LOV to perceive blue light.

Authors:  Emilie Demarsy; Christian Fankhauser
Journal:  Curr Opin Plant Biol       Date:  2008-10-17       Impact factor: 7.834

7.  Conformational switching in the fungal light sensor Vivid.

Authors:  Brian D Zoltowski; Carsten Schwerdtfeger; Joanne Widom; Jennifer J Loros; Alexandrine M Bilwes; Jay C Dunlap; Brian R Crane
Journal:  Science       Date:  2007-05-18       Impact factor: 47.728

8.  FKF1 is essential for photoperiodic-specific light signalling in Arabidopsis.

Authors:  Takato Imaizumi; Hien G Tran; Trevor E Swartz; Winslow R Briggs; Steve A Kay
Journal:  Nature       Date:  2003-11-20       Impact factor: 49.962

9.  Short LOV Proteins in Methylocystis Reveal Insight into LOV Domain Photocycle Mechanisms.

Authors:  Kaley K El-Arab; Ashutosh Pudasaini; Brian D Zoltowski
Journal:  PLoS One       Date:  2015-05-01       Impact factor: 3.240

10.  Biological Significance of Photoreceptor Photocycle Length: VIVID Photocycle Governs the Dynamic VIVID-White Collar Complex Pool Mediating Photo-adaptation and Response to Changes in Light Intensity.

Authors:  Arko Dasgupta; Chen-Hui Chen; ChangHwan Lee; Amy S Gladfelter; Jay C Dunlap; Jennifer J Loros
Journal:  PLoS Genet       Date:  2015-05-15       Impact factor: 5.917

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  7 in total

1.  Kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis.

Authors:  Ashutosh Pudasaini; Jae Sung Shim; Young Hun Song; Hua Shi; Takatoshi Kiba; David E Somers; Takato Imaizumi; Brian D Zoltowski
Journal:  Elife       Date:  2017-02-28       Impact factor: 8.140

Review 2.  Blue-Light Receptors for Optogenetics.

Authors:  Aba Losi; Kevin H Gardner; Andreas Möglich
Journal:  Chem Rev       Date:  2018-07-09       Impact factor: 60.622

3.  Peripheral Methionine Residues Impact Flavin Photoreduction and Protonation in an Engineered LOV Domain Light Sensor.

Authors:  Estella F Yee; Sabine Oldemeyer; Elena Böhm; Abir Ganguly; Darrin M York; Tilman Kottke; Brian R Crane
Journal:  Biochemistry       Date:  2021-03-31       Impact factor: 3.162

Review 4.  How to Train a Cell-Cutting-Edge Molecular Tools.

Authors:  Jakub Czapiński; Michał Kiełbus; Joanna Kałafut; Michał Kos; Andrzej Stepulak; Adolfo Rivero-Müller
Journal:  Front Chem       Date:  2017-03-10       Impact factor: 5.221

5.  Interrelationships of VEL1 and ENV1 in light response and development in Trichoderma reesei.

Authors:  Hoda Bazafkan; Christoph Dattenböck; Eva Stappler; Sabrina Beier; Monika Schmoll
Journal:  PLoS One       Date:  2017-04-19       Impact factor: 3.240

6.  Computational Investigation of Structural and Spectroscopic Properties of LOV-Based Proteins with Improved Fluorescence.

Authors:  Felipe Cardoso Ramos; Lorenzo Cupellini; Benedetta Mennucci
Journal:  J Phys Chem B       Date:  2021-02-10       Impact factor: 2.991

Review 7.  Regulation of plant cell wall degradation by light in Trichoderma.

Authors:  Monika Schmoll
Journal:  Fungal Biol Biotechnol       Date:  2018-04-24
  7 in total

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