Literature DB >> 27226615

Crystal Structures of the SpoIID Lytic Transglycosylases Essential for Bacterial Sporulation.

Salvatore Nocadello1, George Minasov1, Ludmilla S Shuvalova1, Ievgeniia Dubrovska1, Elisabetta Sabini1, Wayne F Anderson2.   

Abstract

Bacterial spores are the most resistant form of life known on Earth and represent a serious problem for (i) bioterrorism attack, (ii) horizontal transmission of microbial pathogens in the community, and (iii) persistence in patients and in a nosocomial environment. Stage II sporulation protein D (SpoIID) is a lytic transglycosylase (LT) essential for sporulation. The LT superfamily is a potential drug target because it is active in essential bacterial processes involving the peptidoglycan, which is unique to bacteria. However, the absence of structural information for the sporulation-specific LT enzymes has hindered mechanistic understanding of SpoIID. Here, we report the first crystal structures with and without ligands of the SpoIID family from two community relevant spore-forming pathogens, Bacillus anthracis and Clostridium difficile. The structures allow us to visualize the overall architecture, characterize the substrate recognition model, identify critical residues, and provide the structural basis for catalysis by this new family of enzymes.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  SpoIID; cell differentiation; cell surface enzyme; drug target; enzyme structure; lytic transglycosylase; peptidoglycan; sporulation

Mesh:

Substances:

Year:  2016        PMID: 27226615      PMCID: PMC4946911          DOI: 10.1074/jbc.M116.729749

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  36 in total

1.  Identification of four families of peptidoglycan lytic transglycosylases.

Authors:  N T Blackburn; A J Clarke
Journal:  J Mol Evol       Date:  2001-01       Impact factor: 2.395

2.  Purification, crystallization and preliminary X-ray study of orotidine 5'-monophosphate decarboxylase.

Authors:  N Wu; D Christendat; A Dharamsi; E F Pai
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-07

3.  A cytoskeleton-like role for the bacterial cell wall during engulfment of the Bacillus subtilis forespore.

Authors:  Angelica Abanes-De Mello; Ya-Lin Sun; Stefan Aung; Kit Pogliano
Journal:  Genes Dev       Date:  2002-12-15       Impact factor: 11.361

Review 4.  Compartmentalization of gene expression during Bacillus subtilis spore formation.

Authors:  David W Hilbert; Patrick J Piggot
Journal:  Microbiol Mol Biol Rev       Date:  2004-06       Impact factor: 11.056

Review 5.  Regulation of endospore formation in Bacillus subtilis.

Authors:  Jeff Errington
Journal:  Nat Rev Microbiol       Date:  2003-11       Impact factor: 60.633

6.  Coot: model-building tools for molecular graphics.

Authors:  Paul Emsley; Kevin Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

7.  Engulfment during sporulation in Bacillus subtilis is governed by a multi-protein complex containing tandemly acting autolysins.

Authors:  Arnaud Chastanet; Richard Losick
Journal:  Mol Microbiol       Date:  2007-04       Impact factor: 3.501

Review 8.  Lytic transglycosylases: bacterial space-making autolysins.

Authors:  Edie Scheurwater; Chris W Reid; Anthony J Clarke
Journal:  Int J Biochem Cell Biol       Date:  2007-03-30       Impact factor: 5.085

9.  Clustal W and Clustal X version 2.0.

Authors:  M A Larkin; G Blackshields; N P Brown; R Chenna; P A McGettigan; H McWilliam; F Valentin; I M Wallace; A Wilm; R Lopez; J D Thompson; T J Gibson; D G Higgins
Journal:  Bioinformatics       Date:  2007-09-10       Impact factor: 6.937

10.  Three-dimensional structure of the bacterial cell wall peptidoglycan.

Authors:  Samy O Meroueh; Krisztina Z Bencze; Dusan Hesek; Mijoon Lee; Jed F Fisher; Timothy L Stemmler; Shahriar Mobashery
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-09       Impact factor: 11.205

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  10 in total

1.  Shaping an Endospore: Architectural Transformations During Bacillus subtilis Sporulation.

Authors:  Kanika Khanna; Javier Lopez-Garrido; Kit Pogliano
Journal:  Annu Rev Microbiol       Date:  2020-07-13       Impact factor: 15.500

Review 2.  Sporulation and Germination in Clostridial Pathogens.

Authors:  Aimee Shen; Adrianne N Edwards; Mahfuzur R Sarker; Daniel Paredes-Sabja
Journal:  Microbiol Spectr       Date:  2019-11

3.  Differential requirements for conserved peptidoglycan remodeling enzymes during Clostridioides difficile spore formation.

Authors:  John W Ribis; Kelly A Fimlaid; Aimee Shen
Journal:  Mol Microbiol       Date:  2018-11       Impact factor: 3.501

Review 4.  Lytic transglycosylases: concinnity in concision of the bacterial cell wall.

Authors:  David A Dik; Daniel R Marous; Jed F Fisher; Shahriar Mobashery
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-06-23       Impact factor: 8.250

5.  Cell differentiation defines acute and chronic infection cell types in Staphylococcus aureus.

Authors:  Juan-Carlos García-Betancur; Angel Goñi-Moreno; Thomas Horger; Melanie Schott; Malvika Sharan; Julian Eikmeier; Barbara Wohlmuth; Alma Zernecke; Knut Ohlsen; Christina Kuttler; Daniel Lopez
Journal:  Elife       Date:  2017-09-12       Impact factor: 8.140

6.  Polyvalent Proteins, a Pervasive Theme in the Intergenomic Biological Conflicts of Bacteriophages and Conjugative Elements.

Authors:  Lakshminarayan M Iyer; A Maxwell Burroughs; Swadha Anand; Robson F de Souza; L Aravind
Journal:  J Bacteriol       Date:  2017-07-11       Impact factor: 3.490

7.  Peptidoglycan degradation machinery in Clostridium difficile forespore engulfment.

Authors:  Marcin Dembek; Abigail Kelly; Anna Barwinska-Sendra; Emma Tarrant; Will A Stanley; Daniela Vollmer; Jacob Biboy; Joe Gray; Waldemar Vollmer; Paula S Salgado
Journal:  Mol Microbiol       Date:  2018-11       Impact factor: 3.501

8.  Acidogenesis, solventogenesis, metabolic stress response and life cycle changes in Clostridium beijerinckii NRRL B-598 at the transcriptomic level.

Authors:  Petra Patakova; Barbora Branska; Karel Sedlar; Maryna Vasylkivska; Katerina Jureckova; Jan Kolek; Pavlina Koscova; Ivo Provaznik
Journal:  Sci Rep       Date:  2019-02-04       Impact factor: 4.379

9.  A SpoIID Homolog Cleaves Glycan Strands at the Chlamydial Division Septum.

Authors:  Nicolas Jacquier; Akhilesh K Yadav; Trestan Pillonel; Patrick H Viollier; Felipe Cava; Gilbert Greub
Journal:  mBio       Date:  2019-07-16       Impact factor: 7.867

10.  The engulfasome in C. difficile: Variations on protein machineries.

Authors:  Abigail Kelly; Paula S Salgado
Journal:  Anaerobe       Date:  2019-08-27       Impact factor: 3.331

  10 in total

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