Literature DB >> 27226551

Developmentally Regulated RNA-binding Protein 1 (Drb1)/RNA-binding Motif Protein 45 (RBM45), a Nuclear-Cytoplasmic Trafficking Protein, Forms TAR DNA-binding Protein 43 (TDP-43)-mediated Cytoplasmic Aggregates.

Takafumi Mashiko1, Eiji Sakashita2, Katsumi Kasashima2, Kaoru Tominaga2, Kenji Kuroiwa2, Yasuyuki Nozaki3, Tohru Matsuura4, Toshiro Hamamoto2, Hitoshi Endo5.   

Abstract

Cytoplasmic protein aggregates are one of the pathological hallmarks of neurodegenerative disorders, including amyotrophic lateral sclerosis (ALS) and frontotemporal lobar degeneration (FTLD). Several RNA-binding proteins have been identified as components of inclusion bodies. Developmentally regulated RNA-binding protein 1 (Drb1)/RNA-binding motif protein 45 is an RNA-binding protein that was recently described as a component in ALS- and FTLD-related inclusion bodies. However, the molecular mechanism underlying cytoplasmic Drb1 aggregation remains unclear. Here, using an in vitro cellular model, we demonstrated that Drb1 co-localizes with cytoplasmic aggregates mediated by TAR DNA-binding protein 43, a major component of ALS and FTLD-related inclusion bodies. We also defined the domains involved in the subcellular localization of Drb1 to clarify the role of Drb1 in the formation of cytoplasmic aggregates in ALS and FTLD. Drb1 predominantly localized in the nucleus via a classical nuclear localization signal in its carboxyl terminus and is a shuttling protein between the nucleus and cytoplasm. Furthermore, we identify a double leucine motif serving as a nuclear export signal. The Drb1 mutant, presenting mutations in both nuclear localization signal and nuclear export signal, is prone to aggregate in the cytoplasm. The mutant Drb1-induced cytoplasmic aggregates not only recruit TAR DNA-binding protein 43 but also decrease the mitochondrial membrane potential. Taken together, these results indicate that perturbation of Drb1 nuclear-cytoplasmic trafficking induces toxic cytoplasmic aggregates, suggesting that mislocalization of Drb1 is involved in the cause of cytotoxicity in neuronal cells.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  ALS (Lou Gehrig disease); RNA binding protein; TAR DNA-binding protein 43 (TDP-43, TARDBP); cytoplasmic inclusion body; frontotemporal lobar degeneration (FTLD); neurodegenerative disease; nuclear-cytoplasmic trafficking; protein aggregation

Mesh:

Substances:

Year:  2016        PMID: 27226551      PMCID: PMC4946918          DOI: 10.1074/jbc.M115.712232

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  45 in total

1.  A90V TDP-43 variant results in the aberrant localization of TDP-43 in vitro.

Authors:  Matthew J Winton; Vivianna M Van Deerlin; Linda K Kwong; Wuxing Yuan; Elisabeth McCarty Wood; Chang-En Yu; Gerard D Schellenberg; Rosa Rademakers; Richard Caselli; Anna Karydas; John Q Trojanowski; Bruce L Miller; Virginia M-Y Lee
Journal:  FEBS Lett       Date:  2008-05-27       Impact factor: 4.124

Review 2.  TARDBP and FUS mutations associated with amyotrophic lateral sclerosis: summary and update.

Authors:  Serena Lattante; Guy A Rouleau; Edor Kabashi
Journal:  Hum Mutat       Date:  2013-04-29       Impact factor: 4.878

3.  Impaired cytoplasmic-nuclear transport of hypoxia-inducible factor-1α in amyotrophic lateral sclerosis.

Authors:  Yuko Nagara; Takahisa Tateishi; Ryo Yamasaki; Shintaro Hayashi; Mami Kawamura; Hitoshi Kikuchi; Kyoko Motomura Iinuma; Masahito Tanaka; Toru Iwaki; Takuya Matsushita; Yasumasa Ohyagi; Jun-ichi Kira
Journal:  Brain Pathol       Date:  2013-03-01       Impact factor: 6.508

4.  Phosphorylated and ubiquitinated TDP-43 pathological inclusions in ALS and FTLD-U are recapitulated in SH-SY5Y cells.

Authors:  Takashi Nonaka; Tetsuaki Arai; Emanuele Buratti; Francisco E Baralle; Haruhiko Akiyama; Masato Hasegawa
Journal:  FEBS Lett       Date:  2008-12-25       Impact factor: 4.124

5.  A compendium of RNA-binding motifs for decoding gene regulation.

Authors:  Debashish Ray; Hilal Kazan; Kate B Cook; Matthew T Weirauch; Hamed S Najafabadi; Xiao Li; Serge Gueroussov; Mihai Albu; Hong Zheng; Ally Yang; Hong Na; Manuel Irimia; Leah H Matzat; Ryan K Dale; Sarah A Smith; Christopher A Yarosh; Seth M Kelly; Behnam Nabet; Desirea Mecenas; Weimin Li; Rakesh S Laishram; Mei Qiao; Howard D Lipshitz; Fabio Piano; Anita H Corbett; Russ P Carstens; Brendan J Frey; Richard A Anderson; Kristen W Lynch; Luiz O F Penalva; Elissa P Lei; Andrew G Fraser; Benjamin J Blencowe; Quaid D Morris; Timothy R Hughes
Journal:  Nature       Date:  2013-07-11       Impact factor: 49.962

6.  Consensus criteria for the diagnosis of frontotemporal cognitive and behavioural syndromes in amyotrophic lateral sclerosis.

Authors:  Michael J Strong; Gloria M Grace; Morris Freedman; Cathy Lomen-Hoerth; Susan Woolley; Laura H Goldstein; Jennifer Murphy; Christen Shoesmith; Jeffery Rosenfeld; P Nigel Leigh; Lucie Bruijn; Paul Ince; Denise Figlewicz
Journal:  Amyotroph Lateral Scler       Date:  2009-06

7.  TLS (FUS) binds RNA in vivo and engages in nucleo-cytoplasmic shuttling.

Authors:  H Zinszner; J Sok; D Immanuel; Y Yin; D Ron
Journal:  J Cell Sci       Date:  1997-08       Impact factor: 5.285

8.  Intracellular localization and splicing regulation of FUS/TLS are variably affected by amyotrophic lateral sclerosis-linked mutations.

Authors:  Yoshihiro Kino; Chika Washizu; Elisa Aquilanti; Misako Okuno; Masaru Kurosawa; Mizuki Yamada; Hiroshi Doi; Nobuyuki Nukina
Journal:  Nucleic Acids Res       Date:  2010-11-24       Impact factor: 16.971

9.  Structural determinants of the cellular localization and shuttling of TDP-43.

Authors:  Youhna M Ayala; Paola Zago; Andrea D'Ambrogio; Ya-Fei Xu; Leonard Petrucelli; Emanuele Buratti; Francisco E Baralle
Journal:  J Cell Sci       Date:  2008-10-28       Impact factor: 5.285

10.  Improving FRET dynamic range with bright green and red fluorescent proteins.

Authors:  Amy J Lam; François St-Pierre; Yiyang Gong; Jesse D Marshall; Paula J Cranfill; Michelle A Baird; Michael R McKeown; Jörg Wiedenmann; Michael W Davidson; Mark J Schnitzer; Roger Y Tsien; Michael Z Lin
Journal:  Nat Methods       Date:  2012-09-09       Impact factor: 28.547

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  8 in total

Review 1.  The roles of intrinsic disorder-based liquid-liquid phase transitions in the "Dr. Jekyll-Mr. Hyde" behavior of proteins involved in amyotrophic lateral sclerosis and frontotemporal lobar degeneration.

Authors:  Vladimir N Uversky
Journal:  Autophagy       Date:  2017-12-17       Impact factor: 16.016

2.  RBM45 competes with HDAC1 for binding to FUS in response to DNA damage.

Authors:  Juanjuan Gong; Min Huang; Fengli Wang; Xiaolu Ma; Hongmei Liu; Yingfeng Tu; Lingyu Xing; Xuefei Zhu; Hui Zheng; Junjie Fang; Xiaoling Li; Qiaochu Wang; Jiuqiang Wang; Zhongshuai Sun; Xi Wang; Yun Wang; Caixia Guo; Tie-Shan Tang
Journal:  Nucleic Acids Res       Date:  2017-12-15       Impact factor: 16.971

3.  TAR DNA Binding Protein-43 Loss of Function Induced by Phosphorylation at S409/410 Blocks Autophagic Flux and Participates in Secondary Brain Injury After Intracerebral Hemorrhage.

Authors:  Liang Sun; Kai Zhang; Weiwei Zhai; Haiying Li; Haitao Shen; Zhengquan Yu; Gang Chen
Journal:  Front Cell Neurosci       Date:  2018-03-22       Impact factor: 5.505

4.  RNA recognition motifs of disease-linked RNA-binding proteins contribute to amyloid formation.

Authors:  Sashank Agrawal; Pan-Hsien Kuo; Lee-Ya Chu; Bagher Golzarroshan; Monika Jain; Hanna S Yuan
Journal:  Sci Rep       Date:  2019-04-16       Impact factor: 4.379

Review 5.  Molecular Mechanisms of TDP-43 Misfolding and Pathology in Amyotrophic Lateral Sclerosis.

Authors:  Archana Prasad; Vidhya Bharathi; Vishwanath Sivalingam; Amandeep Girdhar; Basant K Patel
Journal:  Front Mol Neurosci       Date:  2019-02-14       Impact factor: 5.639

6.  RBM45 associates with nuclear stress bodies and forms nuclear inclusions during chronic cellular stress and in neurodegenerative diseases.

Authors:  Mahlon Collins; Yang Li; Robert Bowser
Journal:  Acta Neuropathol Commun       Date:  2020-06-26       Impact factor: 7.801

7.  RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of mRNAs.

Authors:  Seung H Choi; Mathieu N Flamand; Bei Liu; Huanyu Zhu; Meghan Hu; Melanie Wang; Jonathon Sewell; Christopher L Holley; Hashim M Al-Hashimi; Kate D Meyer
Journal:  Cell Rep       Date:  2022-08-30       Impact factor: 9.995

8.  RNA Binding Motif Protein RBM45 Regulates Expression of the 11-Kilodalton Protein of Parvovirus B19 through Binding to Novel Intron Splicing Enhancers.

Authors:  Jianke Wang; Safder S Ganaie; Fang Cheng; Peng Xu; Kang Ning; Xiaomei Wang; Steve Kleiboeker; Shipeng Cheng; Jianming Qiu
Journal:  mBio       Date:  2020-03-10       Impact factor: 7.867

  8 in total

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