| Literature DB >> 27225846 |
Bernadette Li1, John A Cairns2, Matthew L Robb3, Rachel J Johnson3, Christopher J E Watson4, John L Forsythe5, Gabriel C Oniscu5, Rommel Ravanan6, Christopher Dudley6, Paul Roderick7, Wendy Metcalfe8, Charles R Tomson9, J Andrew Bradley4.
Abstract
BACKGROUND: The influence of donor and recipient factors on outcomes following kidney transplantation is commonly analysed using Cox regression models, but this approach is not useful for predicting long-term survival beyond observed data. We demonstrate the application of a flexible parametric approach to fit a model that can be extrapolated for the purpose of predicting mean patient survival. The primary motivation for this analysis is to develop a predictive model to estimate post-transplant survival based on individual patient characteristics to inform the design of alternative approaches to allocating deceased donor kidneys to those on the transplant waiting list in the United Kingdom.Entities:
Keywords: Extrapolation; Flexible parametric model; Kidney transplantation; Multivariable analysis; Survival
Mesh:
Year: 2016 PMID: 27225846 PMCID: PMC4881185 DOI: 10.1186/s12882-016-0264-0
Source DB: PubMed Journal: BMC Nephrol ISSN: 1471-2369 Impact factor: 2.388
Fig. 1Kaplan-Meier curves and log-rank tests to explore changes in patient survival between different cohorts based on year of transplant: (a) 10-year intervals (b) 5-year intervals and (c) intervals that coincide with changes to the national kidney allocation scheme
Univariate survival analysis by recipient, donor and transplant factors for transplants carried out between 2003 and 2012 (N = 12,307)
| n | % | Observed deaths | Crude mortality rate % |
| |
|---|---|---|---|---|---|
| Recipient age | |||||
| 18-29 | 997 | 8.1 | 43 | 4.3 | <0.001* |
| 30-39 | 2034 | 16.5 | 115 | 5.7 | |
| 40-49 | 3185 | 25.9 | 256 | 8.0 | |
| 50-59 | 3110 | 25.3 | 407 | 13.1 | |
| > 60 | 2981 | 24.2 | 682 | 22.9 | |
| Recipient gender | |||||
| Male | 7628 | 62.0 | 984 | 12.9 | 0.002 |
| Female | 4673 | 38.0 | 517 | 11.1 | |
| Not reported | 6 | 0.1 | - | - | |
| Recipient ethnicity | |||||
| White | 9871 | 80.2 | 1248 | 12.6 | 0.033 |
| Asian | 1376 | 11.2 | 164 | 11.9 | |
| Other | 1049 | 8.5 | 90 | 8.6 | |
| Not reported | 11 | 0.1 | - | - | |
| Transplanted organs | |||||
| Kidney only | 11013 | 89.5 | 1368 | 12.4 | 0.253 |
| Kidney and pancreas | 1294 | 10.5 | 135 | 10.4 | |
| Pre-emptive transplant | |||||
| No | 11019 | 89.5 | 1406 | 12.8 | <0.001 |
| Yes | 1270 | 10.3 | 92 | 7.2 | |
| Not reported | 18 | 0.2 | - | - | |
| cRF | |||||
| 0-9 % | 10026 | 81.5 | 1229 | 12.3 | 0.356 |
| 10-29 % | 523 | 4.3 | 55 | 10.5 | |
| 30-84 % | 1357 | 11.0 | 171 | 12.6 | |
| 85-100 % | 401 | 3.3 | 48 | 12.0 | |
| Waiting time | |||||
| < 6 months | 1941 | 15.8 | 243 | 12.5 | 0.003* |
| 6 months to <2 years | 4129 | 33.6 | 538 | 13.0 | |
| > 2 years | 6237 | 50.7 | 722 | 11.6 | |
| Primary renal disease | |||||
| Glomerulonephritis | 1849 | 15.0 | 186 | 10.1 | <0.001 |
| Diabetic nephropathy (type 1) | 1705 | 13.9 | 230 | 13.5 | |
| Diabetic nephropathy (type 2) | 380 | 3.1 | 71 | 18.7 | |
| Renal vascular disease | 545 | 4.4 | 78 | 14.3 | |
| Polycystic kidney disease | 1513 | 12.3 | 147 | 9.7 | |
| Pyelonephritis | 804 | 6.5 | 95 | 11.8 | |
| Other | 1573 | 12.8 | 181 | 11.5 | |
| Not reported | 3938 | 32.0 | 515 | 13.1 | |
| Donor age | |||||
| < 40 | 3650 | 29.7 | 306 | 8.4 | <0.001* |
| 40-49 | 2754 | 22.4 | 324 | 11.8 | |
| 50-59 | 3200 | 26.0 | 416 | 13.0 | |
| > 60 | 2703 | 22.0 | 457 | 16.9 | |
| Donor type | |||||
| Brain-death donor | 8812 | 71.6 | 1117 | 12.7 | 0.003 |
| Circulatory-death donor | 3495 | 28.4 | 386 | 11.0 | |
| Donor hypertension | |||||
| No | 8688 | 70.6 | 938 | 10.8 | <0.001 |
| Yes | 2525 | 20.5 | 386 | 15.3 | |
| Not reported | 1094 | 8.9 | 179 | 16.4 | |
| Donor diabetes | |||||
| Negative | 10790 | 87.7 | 1268 | 11.8 | 0.021 |
| Positive | 541 | 4.4 | 69 | 12.8 | |
| Not reported | 976 | 7.9 | 166 | 17.0 | |
| Donor weight | |||||
| < 55 kg | 3150 | 25.6 | 380 | 12.1 | 0.036 |
| 55-65 kg | 723 | 5.9 | 62 | 8.6 | |
| 65-75 kg | 1721 | 14.0 | 215 | 12.5 | |
| 75-85 kg | 3234 | 26.3 | 411 | 12.7 | |
| 85-95 kg | 1973 | 16.0 | 226 | 11.5 | |
| > 95 kg | 1342 | 10.9 | 168 | 12.5 | |
| Not reported | 164 | 1.3 | - | - | |
| Donor cause of death | |||||
| Trauma | 1510 | 12.3 | 158 | 10.5 | <0.001 |
| Intracranial | 7954 | 64.6 | 1059 | 13.3 | |
| Other | 2843 | 23.1 | 286 | 10.1 | |
| HLA mismatch | |||||
| Level 1 [000] | 1485 | 12.1 | 193 | 13.0 | 0.001* |
| Level 2 [0 DR + 0/1 B] | 4002 | 32.5 | 467 | 11.7 | |
| Level 3 [0 DR + 2 B] or [1 DR + 0/1 B] | 5192 | 42.2 | 624 | 12.0 | |
| Level 4 [1 DR + 2 B] or [2 DR] | 1628 | 13.2 | 219 | 13.5 | |
| Cold ischaemia time | |||||
| < 12 hrs | 2061 | 16.8 | 177 | 8.6 | 0.310* |
| 12 to <18 hrs | 5859 | 47.6 | 691 | 11.8 | |
| 18 to <24 hrs | 2930 | 23.8 | 427 | 14.6 | |
| > = 24 hrs | 1264 | 10.3 | 186 | 14.7 | |
| Not reported | 193 | 1.6 | - | - |
*log-rank test for trend
Fig. 2Comparison of smoothed hazard function based on observed data and preliminary flexible parametric model (no covariates) fitted with spline function (2 interior knots); Weibull and loglogistic models in the accelerated-failure time (AFT) metric are also shown for comparison
Final flexible parametric model fitted to combined derivation and validation dataset showing coefficients for each of the 3 spline terms for the baseline hazard function and hazard ratios for significant predictors of post-transplant patient survival (N = 12,283)
| Baseline hazard (log hazard scale) | Coefficient |
| 95 % CI | ||
| Restricted cubic spline 1 | 1.03 | <0.001 | 0.97 | - | 1.09 |
| Restricted cubic spline 2 | -0.08 | 0.001 | -0.12 | - | -0.03 |
| Restricted cubic spline 3 | -0.14 | <0.001 | -0.16 | - | -0.12 |
| Constant | -3.97 | <0.001 | -4.31 | - | -3.63 |
| Hazard ratio |
| 95 % CI | |||
| Recipient age | |||||
| 18-29 | Baseline | ||||
| 30-39 | 1.15 | 0.423 | 0.81 | - | 1.64 |
| 40-49 | 1.79 | <0.001 | 1.29 | - | 2.48 |
| 50-59 | 3.22 | <0.001 | 2.35 | - | 4.43 |
| > = 60 | 6.56 | <0.001 | 4.79 | - | 8.98 |
| Recipient gender | |||||
| Male | Baseline | ||||
| Female | 0.89 | 0.028 | 0.80 | - | 0.99 |
| Pre-emptive transplant | |||||
| No | Baseline | ||||
| Yes | 0.66 | <0.001 | 0.53 | - | 0.82 |
| Primary renal diagnosis | |||||
| Glomerulonephritis | Baseline | ||||
| Diabetic nephropathy (type 1) | 2.24 | <0.001 | 1.84 | - | 2.73 |
| Diabetic nephropathy (type 2) | 1.59 | 0.001 | 1.21 | - | 2.09 |
| Polycystic kidney disease | 0.81 | 0.056 | 0.65 | - | 1.01 |
| Other | 1.28 | 0.007 | 1.07 | - | 1.53 |
| Not reported | 1.28 | 0.004 | 1.08 | - | 1.52 |
| Donor hypertension | |||||
| No | Baseline | ||||
| Yes | 1.27 | <0.001 | 1.12 | - | 1.44 |
| Not reported | 1.20 | 0.023 | 1.03 | - | 1.42 |
| Donor age | |||||
| < 40 | Baseline | ||||
| 40-49 | 1.26 | 0.004 | 1.08 | - | 1.48 |
| 50-59 | 1.26 | 0.003 | 1.08 | - | 1.47 |
| > = 60 | 1.48 | <0.001 | 1.26 | - | 1.74 |
Fig. 3Comparison of Kaplan-Meier curves based on observed data (solid lines) and predicted mean survival curves based on final flexible parametric model (dotted lines) by prognostic group
Fig. 4Extrapolated survival curves with mean predicted survival for three different patient profiles