Literature DB >> 27224530

Discovery of high affinity anti-ricin antibodies by B cell receptor sequencing and by yeast display of combinatorial VH:VL libraries from immunized animals.

Bo Wang1, Chang-Han Lee1, Erik L Johnson1, Christien A Kluwe2, Josephine C Cunningham2, Hidetaka Tanno1, Richard M Crooks2, George Georgiou1,2,3,4,5, Andrew D Ellington2,3,4.   

Abstract

Ricin is a toxin that could potentially be used as a bioweapon. We identified anti-ricin A chain antibodies by sequencing the antibody repertoire from immunized mice and by selecting high affinity antibodies using yeast surface display. These methods led to the isolation of multiple antibodies with high (sub-nanomolar) affinity. Interestingly, the antibodies identified by the 2 independent approaches are from the same clonal lineages, indicating for the first time that yeast surface display can identify native antibodies. The new antibodies represent well-characterized reagents for biodefense diagnostics and therapeutics development.

Entities:  

Keywords:  Antibody repertoire analysis; next-generation sequencing; ricin A chain; yeast surface display

Mesh:

Substances:

Year:  2016        PMID: 27224530      PMCID: PMC4968101          DOI: 10.1080/19420862.2016.1190059

Source DB:  PubMed          Journal:  MAbs        ISSN: 1942-0862            Impact factor:   5.857


  44 in total

1.  Comparing CDRH3 diversity captured from secondary lymphoid organs for the generation of recombinant human antibodies.

Authors:  Sophie Venet; Marie Kosco-Vilbois; Nicolas Fischer
Journal:  MAbs       Date:  2013-07-02       Impact factor: 5.857

2.  A fully synthetic human Fab antibody library based on fixed VH/VL framework pairings with favorable biophysical properties.

Authors:  Thomas Tiller; Ingrid Schuster; Dorothée Deppe; Katja Siegers; Ralf Strohner; Tanja Herrmann; Marion Berenguer; Dominique Poujol; Jennifer Stehle; Yvonne Stark; Martin Heßling; Daniela Daubert; Karin Felderer; Stefan Kaden; Johanna Kölln; Markus Enzelberger; Stefanie Urlinger
Journal:  MAbs       Date:  2013-04-09       Impact factor: 5.857

3.  Increasing stability of antibody via antibody engineering: stability engineering on an anti-hVEGF.

Authors:  Shuang Wang; Ming Liu; Dadi Zeng; Weiyi Qiu; Pingping Ma; Yunzhou Yu; Hongyan Chang; Zhiwei Sun
Journal:  Proteins       Date:  2014-07-05

4.  Antigen selection from an HIV-1 immune antibody library displayed on yeast yields many novel antibodies compared to selection from the same library displayed on phage.

Authors:  D R Bowley; A F Labrijn; M B Zwick; D R Burton
Journal:  Protein Eng Des Sel       Date:  2007-01-22       Impact factor: 1.650

5.  Ricin--a potent homicidal poison.

Authors:  B Knight
Journal:  Br Med J       Date:  1979-02-03

6.  A general approach to antibody thermostabilization.

Authors:  Audrey D McConnell; Xue Zhang; John L Macomber; Betty Chau; Joseph C Sheffer; Sorena Rahmanian; Eric Hare; Vladimir Spasojevic; Robert A Horlick; David J King; Peter M Bowers
Journal:  MAbs       Date:  2014       Impact factor: 5.857

7.  IgG variable region and VH CDR3 diversity in unimmunized mice analyzed by massively parallel sequencing.

Authors:  Jin Lu; Tadas Panavas; Kim Thys; Jeroen Aerssens; Michael Naso; Jamie Fisher; Michael Rycyzyn; Raymond W Sweet
Journal:  Mol Immunol       Date:  2013-11-08       Impact factor: 4.407

8.  Flow-cytometric isolation of human antibodies from a nonimmune Saccharomyces cerevisiae surface display library.

Authors:  Michael J Feldhaus; Robert W Siegel; Lee K Opresko; James R Coleman; Jane M Weaver Feldhaus; Yik A Yeung; Jennifer R Cochran; Peter Heinzelman; David Colby; Jeffrey Swers; Christilyn Graff; H Steven Wiley; K Dane Wittrup
Journal:  Nat Biotechnol       Date:  2003-01-21       Impact factor: 54.908

9.  Beyond natural antibodies: the power of in vitro display technologies.

Authors:  Andrew R M Bradbury; Sachdev Sidhu; Stefan Dübel; John McCafferty
Journal:  Nat Biotechnol       Date:  2011-03       Impact factor: 54.908

Review 10.  High affinity, developability and functional size: the holy grail of combinatorial antibody library generation.

Authors:  Dirk Ponsel; Julia Neugebauer; Kathrin Ladetzki-Baehs; Kathrin Tissot
Journal:  Molecules       Date:  2011-05-03       Impact factor: 4.411

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  16 in total

Review 1.  Integrating high-throughput screening and sequencing for monoclonal antibody discovery and engineering.

Authors:  Cristina Parola; Daniel Neumeier; Sai T Reddy
Journal:  Immunology       Date:  2017-10-30       Impact factor: 7.397

2.  Fab is the most efficient format to express functional antibodies by yeast surface display.

Authors:  Coline Sivelle; Raphaël Sierocki; Kelly Ferreira-Pinto; Stéphanie Simon; Bernard Maillere; Hervé Nozach
Journal:  MAbs       Date:  2018-05-24       Impact factor: 5.857

Review 3.  How repertoire data are changing antibody science.

Authors:  Claire Marks; Charlotte M Deane
Journal:  J Biol Chem       Date:  2020-05-14       Impact factor: 5.157

Review 4.  Deep sequencing methods for protein engineering and design.

Authors:  Emily E Wrenbeck; Matthew S Faber; Timothy A Whitehead
Journal:  Curr Opin Struct Biol       Date:  2016-11-22       Impact factor: 6.809

5.  Rare, high-affinity anti-pathogen antibodies from human repertoires, discovered using microfluidics and molecular genomics.

Authors:  Adam S Adler; Rena A Mizrahi; Matthew J Spindler; Matthew S Adams; Michael A Asensio; Robert C Edgar; Jackson Leong; Renee Leong; Lucy Roalfe; Rebecca White; David Goldblatt; David S Johnson
Journal:  MAbs       Date:  2017-08-28       Impact factor: 5.857

6.  A novel one-step approach for the construction of yeast surface display Fab antibody libraries.

Authors:  Simon Rosowski; Stefan Becker; Lars Toleikis; Bernhard Valldorf; Julius Grzeschik; Deniz Demir; Iris Willenbücher; Ramona Gaa; Harald Kolmar; Stefan Zielonka; Simon Krah
Journal:  Microb Cell Fact       Date:  2018-01-09       Impact factor: 5.328

Review 7.  Analyzing Immunoglobulin Repertoires.

Authors:  Neha Chaudhary; Duane R Wesemann
Journal:  Front Immunol       Date:  2018-03-14       Impact factor: 7.561

8.  Functional interrogation and mining of natively paired human VH:VL antibody repertoires.

Authors:  Bo Wang; Brandon J DeKosky; Morgan R Timm; Jiwon Lee; Erica Normandin; John Misasi; Rui Kong; Jonathan R McDaniel; George Delidakis; Kendra E Leigh; Thomas Niezold; Chang W Choi; Elise G Viox; Ahmed Fahad; Alberto Cagigi; Aurélie Ploquin; Kwanyee Leung; Eun Sung Yang; Wing-Pui Kong; William N Voss; Aaron G Schmidt; M Anthony Moody; David R Ambrozak; Amy R Henry; Farida Laboune; Julie E Ledgerwood; Barney S Graham; Mark Connors; Daniel C Douek; Nancy J Sullivan; Andrew D Ellington; John R Mascola; George Georgiou
Journal:  Nat Biotechnol       Date:  2018-01-08       Impact factor: 54.908

9.  Rare, high-affinity mouse anti-PD-1 antibodies that function in checkpoint blockade, discovered using microfluidics and molecular genomics.

Authors:  Adam S Adler; Rena A Mizrahi; Matthew J Spindler; Matthew S Adams; Michael A Asensio; Robert C Edgar; Jackson Leong; Renee Leong; David S Johnson
Journal:  MAbs       Date:  2017-08-28       Impact factor: 5.857

10.  A natively paired antibody library yields drug leads with higher sensitivity and specificity than a randomly paired antibody library.

Authors:  Adam S Adler; Daniel Bedinger; Matthew S Adams; Michael A Asensio; Robert C Edgar; Renee Leong; Jackson Leong; Rena A Mizrahi; Matthew J Spindler; Srinivasa Rao Bandi; Haichun Huang; Pallavi Tawde; Peter Brams; David S Johnson
Journal:  MAbs       Date:  2018-02-01       Impact factor: 5.857

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