| Literature DB >> 27224443 |
Samar Farha1, Bo Hu1, Suzy Comhair1, Joe Zein2, Raed Dweik1,2, Serpil C Erzurum1,2, Micheala A Aldred1,3.
Abstract
Pulmonary arterial hypertension (PAH) is a serious and often fatal disease. It is a panvasculopathy of the pulmonary microcirculation characterized by vasoconstriction and arterial obstruction due to vascular proliferation and remodeling and ultimately right ventricular failure. Mitochondrial dysfunction is a universal finding in pulmonary vascular cells of patients with PAH, and is mechanistically linked to disease origins in animal models of pulmonary hypertension. Mitochondria have their own circular DNA (mtDNA), which can be subgrouped into polymorphic haplogroup variants, some of which have been identified as at-risk or protective from cardiovascular and/or neurodegenerative diseases. Here, we hypothesized that mitochondrial haplogroups may be associated with PAH. To test this, mitochondrial haplogroups were determined in a cohort of PAH patients and controls [N = 204 Caucasians (125 PAH and 79 controls) and N = 46 African Americans (13 PAH and 33 controls)]. Haplogroup L was associated with a lower rate of PAH as compared to macrohaplogroups N and M. When haplogroups were nested based on ancestral inheritance and controlled for age, gender and race, haplogroups M and HV, JT and UK of the N macro-haplogroup had significantly higher rates of PAH compared to the ancestral L (L0/1/2 and L3) (all p ≤ 0.05). Overall, the findings suggest that mitochondrial haplogroups influence risk of PAH and that a vulnerability to PAH may have emerged under the selective enrichment of specific haplogroups that occurred with the migration of populations out of Africa.Entities:
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Year: 2016 PMID: 27224443 PMCID: PMC4880300 DOI: 10.1371/journal.pone.0156042
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Single nucleotide polymorphisms used to define each haplogroup.
| Base Position | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrial Haplogroups | 663 | 1719 | 3594 | 4580 | 7028 | 8251 | 9055 | 10398 | 10400 | 12308 | 12612 | 15607 | 16391 | other |
| A | G | G | C | G | T | G | G | A | C | A | A | A | G | |
| H | A | G | C | G | C | G | G | A | C | A | A | A | G | |
| I | A | G | C | G | T | G | G | A | C | A | A | A | A | |
| J | A | G | C | G | T | G | G | G | C | A | G | A | G | |
| K | A | G | C | G | T | G | A | G | C | G | A | A | G | |
| L0/L1/L2 | A | G | T | G | T | G | G | G | C | A | A | A | G | |
| L3 | A | G | C | G | T | G | G | G | C | A | A | A | G | A10819 or A10086G |
| M | A | G | C | G | T | G | G | G | T | A | A | A | G | |
| T | A | G | C | G | T | G | G | A | C | A | A | G | G | |
| U | A | G | C | G | T | G | G | A | C | G | A | A | G | |
| V | A | G | C | A | T | G | G | A | C | A | A | A | G | |
| W | A | G | C | G | T | A | G | A | C | A | A | A | G | |
| X | A | A | C | G | T | G | G | A | C | A | A | A | G | |
Distribution of mitochondrial haplogroups by race and disease.
| Caucasian (N = 204) | African American (N = 46) | |||
|---|---|---|---|---|
| Mitochondrial Haplogroups | PAH (N = 125) | Controls (N = 79) | PAH (N = 13) | Controls (N = 33) |
| 2 (1.6%) | 1 (1.27%) | 0 (0%) | 0 (0%) | |
| 50 (40%) | 40 (50.63%) | 1 (7.69%) | 0 (0%) | |
| 0 (0%) | 1 (1.27%) | 0 (0%) | 0 (0%) | |
| 7 (5.6%) | 4 (5.06%) | 1 (7.69%) | 0 (0%) | |
| 12 (9.6%) | 4 (5.06%) | 0 (0%) | 0 (0%) | |
| 1 (0.8%) | 0 (0%) | 8 (61.54%) | 22 (66.67%) | |
| 0 (0%) | 1 (1.27%) | 1 (7.69%) | 10 (30.30%) | |
| 5 (4%) | 1 (1.27%) | 1 (7.69%) | 0 (0%) | |
| 21 (16.8%) | 10 (12.66%) | 0 (0%) | 0 (0%) | |
| 15 (12%) | 9 (11.39%) | 1 (7.69%) | 1 (3.03%) | |
| 4 (3.2%) | 2 (2.53%) | 0 (0%) | 0 (0%) | |
| 6 (4.8%) | 4 (5.06%) | 0 (0%) | 0 (0%) | |
| 2 (1.60%) | 2 (2.53%) | 0 (0%) | 0 (0%) | |
Fig 1Mitochondrial haplogroup tree with the Eve mitochondrial haplogroup L originating in Africa and migrating out as haplogroups M and N acquired variants allowing for adaptation to different climates and geographical conditions.
The different haplogroups are shown according to the timeline and their branching from the major macrohaplogroups M and N. The graph shows percentage of PAH or control populations by haplogroup distribution.
Odds ratio (OR) of having PAH in comparison to haplogroup L (L0/1/2 and L3) after controlling for gender, age, and race.
Haplogroups were grouped based on their branching points and temporal evolution into M, HV, JT, UK and the others (AIWX).
| Mitochondrial Haplogroups | OR | 95% C.I. | p-value |
|---|---|---|---|
| 10.72 | 1.2–95.78 | 0.034 | |
| 47.93 | 2.88–797.01 | 0.007 | |
| 15.59 | 1.97–123.12 | 0.009 | |
| 10.81 | 1.4–83.39 | 0.022 | |
| 0.33 | 0–2.38E+187 | 0.996 |
Odds ratio (OR) of having PAH in comparison to haplogroup HV after controlling for gender and age within Caucasians.
| Mitochondrial Haplogroups | OR | 95% C.I. | p-value |
|---|---|---|---|
| 0.57 | 0-Inf | 1 | |
| 3.41 | 0.27–43.15 | 0.343 | |
| 1.52 | 0.42–5.47 | 0.523 | |
| 0.93 | 0.27–3.23 | 0.906 | |
| 1.06 | 0-Inf | 1 |