Literature DB >> 27221459

Applications of isothermal titration calorimetry - the research and technical developments from 2011 to 2015.

Robert J Falconer1.   

Abstract

Isothermal titration calorimetry is a widely used biophysical technique for studying the formation or dissociation of molecular complexes. Over the last 5 years, much work has been published on the interpretation of isothermal titration calorimetry (ITC) data for single binding and multiple binding sites. As over 80% of ITC papers are on macromolecules of biological origin, this interpretation is challenging. Some researchers have attempted to link the thermodynamics constants to events at the molecular level. This review highlights work carried out using binding sites characterized using x-ray crystallography techniques that allow speculation about individual bond formation and the displacement of individual water molecules during ligand binding and link these events to the thermodynamic constants for binding. The review also considers research conducted with synthetic binding partners where specific binding events like anion-π and π-π interactions were studied. The revival of assays that enable both thermodynamic and kinetic information to be collected from ITC data is highlighted. Lastly, published criticism of ITC research from a physical chemistry perspective is appraised and practical advice provided for researchers unfamiliar with thermodynamics and its interpretation.
Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

Entities:  

Keywords:  ITC; allostery; drug discovery; enzyme kinetics; interactions; kinITC; thermodynamics; thermolysin

Mesh:

Substances:

Year:  2016        PMID: 27221459     DOI: 10.1002/jmr.2550

Source DB:  PubMed          Journal:  J Mol Recognit        ISSN: 0952-3499            Impact factor:   2.137


  16 in total

1.  Protein-ligand binding enthalpies from near-millisecond simulations: Analysis of a preorganization paradox.

Authors:  Amanda Li; Michael K Gilson
Journal:  J Chem Phys       Date:  2018-08-21       Impact factor: 3.488

Review 2.  In Vitro Analytical Approaches to Study Plant Ligand-Receptor Interactions.

Authors:  Pedro Jimenez Sandoval; Julia Santiago
Journal:  Plant Physiol       Date:  2020-02-07       Impact factor: 8.340

3.  Uncertainty in protein-ligand binding constants: asymmetric confidence intervals versus standard errors.

Authors:  Vaida Paketurytė; Vytautas Petrauskas; Asta Zubrienė; Olga Abian; Margarida Bastos; Wen-Yih Chen; Maria João Moreno; Georg Krainer; Vaida Linkuvienė; Arthur Sedivy; Adrian Velazquez-Campoy; Mark A Williams; Daumantas Matulis
Journal:  Eur Biophys J       Date:  2021-04-10       Impact factor: 1.733

4.  An update on anticancer drug development and delivery targeting carbonic anhydrase IX.

Authors:  Justina Kazokaitė; Ashok Aspatwar; Seppo Parkkila; Daumantas Matulis
Journal:  PeerJ       Date:  2017-11-23       Impact factor: 2.984

5.  Crystal structure correlations with the intrinsic thermodynamics of human carbonic anhydrase inhibitor binding.

Authors:  Alexey Smirnov; Asta Zubrienė; Elena Manakova; Saulius Gražulis; Daumantas Matulis
Journal:  PeerJ       Date:  2018-02-26       Impact factor: 2.984

Review 6.  Overview of the detection methods for equilibrium dissociation constant KD of drug-receptor interaction.

Authors:  Weina Ma; Liu Yang; Langchong He
Journal:  J Pharm Anal       Date:  2018-05-05

Review 7.  Biophysical, Biochemical, and Cell Based Approaches Used to Decipher the Role of Carbonic Anhydrases in Cancer and to Evaluate the Potency of Targeted Inhibitors.

Authors:  Mam Y Mboge; Anusha Kota; Robert McKenna; Susan C Frost
Journal:  Int J Med Chem       Date:  2018-07-16

Review 8.  Assays and technologies for developing proteolysis targeting chimera degraders.

Authors:  Xingui Liu; Xuan Zhang; Dongwen Lv; Yaxia Yuan; Guangrong Zheng; Daohong Zhou
Journal:  Future Med Chem       Date:  2020-05-20       Impact factor: 3.808

9.  Free Solution Assay Signal Modulation in Variable-Stem-Length Hairpin Aptamers.

Authors:  Michael N Kammer; Amanda K Kussrow; Ian R Olmsted; George W Jackson; Darryl J Bornhop
Journal:  ACS Omega       Date:  2020-05-14

10.  Comparison of the Binding of Reversible Inhibitors to Human Butyrylcholinesterase and Acetylcholinesterase: A Crystallographic, Kinetic and Calorimetric Study.

Authors:  Terrone L Rosenberry; Xavier Brazzolotto; Ian R Macdonald; Marielle Wandhammer; Marie Trovaslet-Leroy; Sultan Darvesh; Florian Nachon
Journal:  Molecules       Date:  2017-11-29       Impact factor: 4.411

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