Literature DB >> 27219704

Sequence-defined bioactive macrocycles via an acid-catalysed cascade reaction.

Mintu Porel1, Dana N Thornlow1, Ngoc N Phan1, Christopher A Alabi1.   

Abstract

Synthetic macrocycles derived from sequence-defined oligomers are a unique structural class whose ring size, sequence and structure can be tuned via precise organization of the primary sequence. Similar to peptides and other peptidomimetics, these well-defined synthetic macromolecules become pharmacologically relevant when bioactive side chains are incorporated into their primary sequence. In this article, we report the synthesis of oligothioetheramide (oligoTEA) macrocycles via a one-pot acid-catalysed cascade reaction. The versatility of the cyclization chemistry and modularity of the assembly process was demonstrated via the synthesis of >20 diverse oligoTEA macrocycles. Structural characterization via NMR spectroscopy revealed the presence of conformational isomers, which enabled the determination of local chain dynamics within the macromolecular structure. Finally, we demonstrate the biological activity of oligoTEA macrocycles designed to mimic facially amphiphilic antimicrobial peptides. The preliminary results indicate that macrocyclic oligoTEAs with just two-to-three cationic charge centres can elicit potent antibacterial activity against Gram-positive and Gram-negative bacteria.

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Year:  2016        PMID: 27219704     DOI: 10.1038/nchem.2508

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  39 in total

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Authors:  John S Davies
Journal:  J Pept Sci       Date:  2003-08       Impact factor: 1.905

Review 2.  The exploration of macrocycles for drug discovery--an underexploited structural class.

Authors:  Edward M Driggers; Stephen P Hale; Jinbo Lee; Nicholas K Terrett
Journal:  Nat Rev Drug Discov       Date:  2008-07       Impact factor: 84.694

Review 3.  Observing biological dynamics at atomic resolution using NMR.

Authors:  Anthony K Mittermaier; Lewis E Kay
Journal:  Trends Biochem Sci       Date:  2009-10-19       Impact factor: 13.807

Review 4.  Contemporary strategies for peptide macrocyclization.

Authors:  Christopher J White; Andrei K Yudin
Journal:  Nat Chem       Date:  2011-06-23       Impact factor: 24.427

5.  A call to arms: the imperative for antimicrobial stewardship.

Authors:  John G Bartlett
Journal:  Clin Infect Dis       Date:  2011-08       Impact factor: 9.079

6.  Sequence-defined polymers via orthogonal allyl acrylamide building blocks.

Authors:  Mintu Porel; Christopher A Alabi
Journal:  J Am Chem Soc       Date:  2014-09-16       Impact factor: 15.419

7.  Sequence-regulated copolymers via tandem catalysis of living radical polymerization and in situ transesterification.

Authors:  Kazuhiro Nakatani; Yusuke Ogura; Yuta Koda; Takaya Terashima; Mitsuo Sawamoto
Journal:  J Am Chem Soc       Date:  2012-02-24       Impact factor: 15.419

8.  In vitro antibacterial properties of pexiganan, an analog of magainin.

Authors:  Y Ge; D L MacDonald; K J Holroyd; C Thornsberry; H Wexler; M Zasloff
Journal:  Antimicrob Agents Chemother       Date:  1999-04       Impact factor: 5.191

9.  Beta-peptidic peptidomimetics.

Authors:  Dieter Seebach; James Gardiner
Journal:  Acc Chem Res       Date:  2008-06-26       Impact factor: 22.384

10.  Sequence control in polymer chemistry through the Passerini three-component reaction.

Authors:  Susanne C Solleder; Michael A R Meier
Journal:  Angew Chem Int Ed Engl       Date:  2013-12-04       Impact factor: 15.336

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  9 in total

1.  Discovery of Nucleic Acid Binding Molecules from Combinatorial Biohybrid Nucleobase Peptide Libraries.

Authors:  Sebastian Pomplun; Zachary P Gates; Genwei Zhang; Anthony J Quartararo; Bradley L Pentelute
Journal:  J Am Chem Soc       Date:  2020-11-09       Impact factor: 15.419

2.  Dynamic covalent chemistry enables formation of antimicrobial peptide quaternary assemblies in a completely abiotic manner.

Authors:  James F Reuther; Justine L Dees; Igor V Kolesnichenko; Erik T Hernandez; Dmitri V Ukraintsev; Rusheel Guduru; Marvin Whiteley; Eric V Anslyn
Journal:  Nat Chem       Date:  2017-08-21       Impact factor: 24.427

3.  A Versatile Approach to Noncanonical, Dynamic Covalent Single- and Multi-Loop Peptide Macrocycles for Enhancing Antimicrobial Activity.

Authors:  James F Reuther; Andrew C Goodrich; P Rogelio Escamilla; Tiffany A Lu; Valarie Del Rio; Bryan W Davies; Eric V Anslyn
Journal:  J Am Chem Soc       Date:  2018-03-01       Impact factor: 15.419

4.  Geared Toward Applications: A Perspective on Functional Sequence-Controlled Polymers.

Authors:  Cangjie Yang; Kevin B Wu; Yu Deng; Jingsong Yuan; Jia Niu
Journal:  ACS Macro Lett       Date:  2021-01-20       Impact factor: 6.903

5.  Synthesis and Solution-Phase Characterization of Sulfonated Oligothioetheramides.

Authors:  Joseph S Brown; Yaset M Acevedo; Grace D He; Jack H Freed; Paulette Clancy; Christopher A Alabi
Journal:  Macromolecules       Date:  2017-11-01       Impact factor: 5.985

6.  Coding and decoding libraries of sequence-defined functional copolymers synthesized via photoligation.

Authors:  Nicolas Zydziak; Waldemar Konrad; Florian Feist; Sergii Afonin; Steffen Weidner; Christopher Barner-Kowollik
Journal:  Nat Commun       Date:  2016-11-30       Impact factor: 14.919

7.  Antibacterial isoamphipathic oligomers highlight the importance of multimeric lipid aggregation for antibacterial potency.

Authors:  Joseph S Brown; Zeinab J Mohamed; Christine M Artim; Dana N Thornlow; Joseph F Hassler; Vincent P Rigoglioso; Susan Daniel; Christopher A Alabi
Journal:  Commun Biol       Date:  2018-12-07

8.  Synthesis of polymers with on-demand sequence structures via dually switchable and interconvertible polymerizations.

Authors:  Ze Zhang; Tian-You Zeng; Lei Xia; Chun-Yan Hong; De-Cheng Wu; Ye-Zi You
Journal:  Nat Commun       Date:  2018-07-03       Impact factor: 14.919

9.  Multifunctional sequence-defined macromolecules for chemical data storage.

Authors:  Steven Martens; Annelies Landuyt; Pieter Espeel; Bart Devreese; Peter Dawyndt; Filip Du Prez
Journal:  Nat Commun       Date:  2018-10-26       Impact factor: 14.919

  9 in total

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