Literature DB >> 27217104

Cobalamin's (Vitamin B12) Surprising Function as a Photoreceptor.

Zhuo Cheng1, Haruki Yamamoto1, Carl E Bauer2.   

Abstract

Cobalamin (Vitamin B12) is an adenosyl- or methyl-donating cofactor for many enzymes, yet many proteins with unknown or nonenzymatic function also contain B12-binding domains. Recent studies show that light excitation energy can promote covalent linkage of B12 to transcription factors with this linkage, affecting gene expression. Thus, B12 now has a newly described regulatory function. Here, our bioinformatics analysis reveals other transcription factors, photoreceptors, kinases, and oxygen sensors that harbor a B12-binding domain that could also regulate activity in response to light absorption.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  light-regulated gene regulation; photobiology

Mesh:

Substances:

Year:  2016        PMID: 27217104      PMCID: PMC4967030          DOI: 10.1016/j.tibs.2016.05.002

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  11 in total

Review 1.  Photosensing in chemotrophic, non-phototrophic bacteria: let there be light sensing too.

Authors:  Michael A van der Horst; Jason Key; Klaas J Hellingwerf
Journal:  Trends Microbiol       Date:  2007-11-19       Impact factor: 17.079

Review 2.  Vitamin B12-derivatives-enzyme cofactors and ligands of proteins and nucleic acids.

Authors:  Karl Gruber; Barbara Puffer; Bernhard Kräutler
Journal:  Chem Soc Rev       Date:  2011-06-20       Impact factor: 54.564

3.  Light-dependent gene regulation by a coenzyme B12-based photoreceptor.

Authors:  Juan Manuel Ortiz-Guerrero; María Carmen Polanco; Francisco J Murillo; S Padmanabhan; Montserrat Elías-Arnanz
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-18       Impact factor: 11.205

Review 4.  Structure-based perspectives on B12-dependent enzymes.

Authors:  M L Ludwig; R G Matthews
Journal:  Annu Rev Biochem       Date:  1997       Impact factor: 23.643

5.  Vitamin B12 regulates photosystem gene expression via the CrtJ antirepressor AerR in Rhodobacter capsulatus.

Authors:  Zhuo Cheng; Keran Li; Loubna A Hammad; Jonathan A Karty; Carl E Bauer
Journal:  Mol Microbiol       Date:  2014-01-09       Impact factor: 3.501

Review 6.  Controlling the delicate balance of tetrapyrrole biosynthesis.

Authors:  Liang Yin; Carl E Bauer
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-06-10       Impact factor: 6.237

7.  How a protein binds B12: A 3.0 A X-ray structure of B12-binding domains of methionine synthase.

Authors:  C L Drennan; S Huang; J T Drummond; R G Matthews; M L Ludwig
Journal:  Science       Date:  1994-12-09       Impact factor: 47.728

8.  Pfam: the protein families database.

Authors:  Robert D Finn; Alex Bateman; Jody Clements; Penelope Coggill; Ruth Y Eberhardt; Sean R Eddy; Andreas Heger; Kirstie Hetherington; Liisa Holm; Jaina Mistry; Erik L L Sonnhammer; John Tate; Marco Punta
Journal:  Nucleic Acids Res       Date:  2013-11-27       Impact factor: 16.971

9.  Structural basis for gene regulation by a B12-dependent photoreceptor.

Authors:  Marco Jost; Jésus Fernández-Zapata; María Carmen Polanco; Juan Manuel Ortiz-Guerrero; Percival Yang-Ting Chen; Gyunghoon Kang; S Padmanabhan; Montserrat Elías-Arnanz; Catherine L Drennan
Journal:  Nature       Date:  2015-09-28       Impact factor: 49.962

10.  The photochemical mechanism of a B12-dependent photoreceptor protein.

Authors:  Roger J Kutta; Samantha J O Hardman; Linus O Johannissen; Bruno Bellina; Hanan L Messiha; Juan Manuel Ortiz-Guerrero; Montserrat Elías-Arnanz; S Padmanabhan; Perdita Barran; Nigel S Scrutton; Alex R Jones
Journal:  Nat Commun       Date:  2015-08-12       Impact factor: 14.919

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  9 in total

Review 1.  Optophysiology: Illuminating cell physiology with optogenetics.

Authors:  Peng Tan; Lian He; Yun Huang; Yubin Zhou
Journal:  Physiol Rev       Date:  2022-01-24       Impact factor: 37.312

2.  Structural Analyses of CrtJ and Its B12-Binding Co-Regulators SAerR and LAerR from the Purple Photosynthetic Bacterium Rhodobacter capsulatus.

Authors:  Vladimira Dragnea; Giovanni Gonzalez-Gutierrez; Carl E Bauer
Journal:  Microorganisms       Date:  2022-04-27

3.  Exposure to Broad-Spectrum Visible Light Causes Major Transcriptomic Changes in Listeria monocytogenes EGDe.

Authors:  Kristin Sæbø Pettersen; Arvind Y M Sundaram; Taran Skjerdal; Yngvild Wasteson; Anne Kijewski; Toril Lindbäck; Marina Aspholm
Journal:  Appl Environ Microbiol       Date:  2019-10-30       Impact factor: 4.792

4.  A Cobalamin Activity-Based Probe Enables Microbial Cell Growth and Finds New Cobalamin-Protein Interactions across Domains.

Authors:  Joshua J Rosnow; Sungmin Hwang; Bryan J Killinger; Young-Mo Kim; Ronald J Moore; Stephen R Lindemann; Julie A Maupin-Furlow; Aaron T Wright
Journal:  Appl Environ Microbiol       Date:  2018-08-31       Impact factor: 4.792

5.  The Vitamin B12-Dependent Photoreceptor AerR Relieves Photosystem Gene Repression by Extending the Interaction of CrtJ with Photosystem Promoters.

Authors:  Mingxu Fang; Carl E Bauer
Journal:  MBio       Date:  2017-03-21       Impact factor: 7.867

6.  Differing isoforms of the cobalamin binding photoreceptor AerR oppositely regulate photosystem expression.

Authors:  Haruki Yamamoto; Mingxu Fang; Vladimira Dragnea; Carl E Bauer
Journal:  Elife       Date:  2018-10-03       Impact factor: 8.140

7.  Metagenomic and chemical characterization of soil cobalamin production.

Authors:  Xinda Lu; Katherine R Heal; Anitra E Ingalls; Andrew C Doxey; Josh D Neufeld
Journal:  ISME J       Date:  2019-09-06       Impact factor: 10.302

8.  Photosensing and quorum sensing are integrated to control Pseudomonas aeruginosa collective behaviors.

Authors:  Sampriti Mukherjee; Matthew Jemielita; Vasiliki Stergioula; Mikhail Tikhonov; Bonnie L Bassler
Journal:  PLoS Biol       Date:  2019-12-12       Impact factor: 8.029

Review 9.  Antivitamins B12 -Some Inaugural Milestones.

Authors:  Bernhard Kräutler
Journal:  Chemistry       Date:  2020-11-03       Impact factor: 5.236

  9 in total

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