Literature DB >> 27215587

Sources and Functions of Extracellular Small RNAs in Human Circulation.

Joëlle V Fritz1, Anna Heintz-Buschart1, Anubrata Ghosal2, Linda Wampach1, Alton Etheridge3, David Galas1,3, Paul Wilmes1.   

Abstract

Various biotypes of endogenous small RNAs (sRNAs) have been detected in human circulation, including microRNAs, transfer RNAs, ribosomal RNA, and yRNA fragments. These extracellular sRNAs (ex-sRNAs) are packaged and secreted by many different cell types. Ex-sRNAs exhibit differences in abundance in several disease states and have, therefore, been proposed for use as effective biomarkers. Furthermore, exosome-borne ex-sRNAs have been reported to elicit physiological responses in acceptor cells. Exogenous ex-sRNAs derived from diet (most prominently from plants) and microorganisms have also been reported in human blood. Essential issues that remain to be conclusively addressed concern the (a) presence and sources of exogenous ex-sRNAs in human bodily fluids, (b) detection and measurement of ex-sRNAs in human circulation, (c) selectivity of ex-sRNA export and import, (d) sensitivity and specificity of ex-sRNA delivery to cellular targets, and (e) cell-, tissue-, organ-, and organism-wide impacts of ex-sRNA-mediated cell-to-cell communication. We survey the present state of knowledge of most of these issues in this review.

Entities:  

Keywords:  blood; gene regulation; microRNA; microorganisms; plant; vesicle

Mesh:

Substances:

Year:  2016        PMID: 27215587      PMCID: PMC5479634          DOI: 10.1146/annurev-nutr-071715-050711

Source DB:  PubMed          Journal:  Annu Rev Nutr        ISSN: 0199-9885            Impact factor:   11.848


  233 in total

1.  Anticoagulants interfere with PCR used to diagnose invasive aspergillosis.

Authors:  Marta E García; Jose L Blanco; Jesús Caballero; Domingo Gargallo-Viola
Journal:  J Clin Microbiol       Date:  2002-04       Impact factor: 5.948

2.  Crystal structure of an early protein-RNA assembly complex of the signal recognition particle.

Authors:  K Wild; I Sinning; S Cusack
Journal:  Science       Date:  2001-10-19       Impact factor: 47.728

3.  Heparin interference with reverse transcriptase polymerase chain reaction of RNA extracted from lungs after ischemia-reperfusion.

Authors:  X Bai; S Fischer; S Keshavjee; M Liu
Journal:  Transpl Int       Date:  2000       Impact factor: 3.782

4.  Stability of endogenous and added RNA in blood specimens, serum, and plasma.

Authors:  Nancy B Y Tsui; Enders K O Ng; Y M Dennis Lo
Journal:  Clin Chem       Date:  2002-10       Impact factor: 8.327

5.  7SK small nuclear RNA binds to and inhibits the activity of CDK9/cyclin T complexes.

Authors:  V T Nguyen; T Kiss; A A Michels; O Bensaude
Journal:  Nature       Date:  2001-11-15       Impact factor: 49.962

6.  Identification of tissue-specific microRNAs from mouse.

Authors:  Mariana Lagos-Quintana; Reinhard Rauhut; Abdullah Yalcin; Jutta Meyer; Winfried Lendeckel; Thomas Tuschl
Journal:  Curr Biol       Date:  2002-04-30       Impact factor: 10.834

7.  Systemic RNAi in C. elegans requires the putative transmembrane protein SID-1.

Authors:  William M Winston; Christina Molodowitch; Craig P Hunter
Journal:  Science       Date:  2002-02-07       Impact factor: 47.728

8.  Transport of dsRNA into cells by the transmembrane protein SID-1.

Authors:  Evan H Feinberg; Craig P Hunter
Journal:  Science       Date:  2003-09-12       Impact factor: 47.728

9.  Simultaneous onset of acute inflammatory response, sepsis-like symptoms and intestinal mucosal injury after cancer chemotherapy.

Authors:  Eiichi Tsuji; Naoki Hiki; Sachiyo Nomura; Ryoji Fukushima; Jun-ichi Kojima; Toshihisa Ogawa; Ken-ichi Mafune; Yoshikazu Mimura; Michio Kaminishi
Journal:  Int J Cancer       Date:  2003-11-01       Impact factor: 7.396

10.  Systematic functional analysis of the Caenorhabditis elegans genome using RNAi.

Authors:  Ravi S Kamath; Andrew G Fraser; Yan Dong; Gino Poulin; Richard Durbin; Monica Gotta; Alexander Kanapin; Nathalie Le Bot; Sergio Moreno; Marc Sohrmann; David P Welchman; Peder Zipperlen; Julie Ahringer
Journal:  Nature       Date:  2003-01-16       Impact factor: 49.962

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  48 in total

1.  Characterization of Extracellular Vesicles from Entamoeba histolytica Identifies Roles in Intercellular Communication That Regulates Parasite Growth and Development.

Authors:  Manu Sharma; Pedro Morgado; Hanbang Zhang; Gretchen Ehrenkaufer; Dipak Manna; Upinder Singh
Journal:  Infect Immun       Date:  2020-09-18       Impact factor: 3.441

Review 2.  Tiny RNAs and their voyage via extracellular vesicles: Secretion of bacterial small RNA and eukaryotic microRNA.

Authors:  Ji-Woong Choi; Jee-Hyun Um; Jin-Hyun Cho; Heon-Jin Lee
Journal:  Exp Biol Med (Maywood)       Date:  2017-07-25

Review 3.  Uptake and impact of natural diet-derived small RNA in invertebrates: Implications for ecology and agriculture.

Authors:  Stephen Y Chan; Jonathan W Snow
Journal:  RNA Biol       Date:  2016-10-20       Impact factor: 4.652

Review 4.  cfRNAs as biomarkers in oncology - still experimental or applied tool for personalized medicine already?

Authors:  Tomasz Kolenda; Kacper Guglas; Dawid Baranowski; Joanna Sobocińska; Magda Kopczyńska; Anna Teresiak; Renata Bliźniak; Katarzyna Lamperska
Journal:  Rep Pract Oncol Radiother       Date:  2020-08-11

Review 5.  Circulating cell-free nucleic acids: characteristics and applications.

Authors:  Ondrej Pös; Orsolya Biró; Tomas Szemes; Bálint Nagy
Journal:  Eur J Hum Genet       Date:  2018-04-23       Impact factor: 4.246

Review 6.  Versatile effects of bacterium-released membrane vesicles on mammalian cells and infectious/inflammatory diseases.

Authors:  You-Jiang Yu; Xiao-Hong Wang; Guo-Chang Fan
Journal:  Acta Pharmacol Sin       Date:  2017-08-31       Impact factor: 6.150

Review 7.  Liquid biopsy for brain tumors.

Authors:  Ganesh M Shankar; Leonora Balaj; Shannon L Stott; Brian Nahed; Bob S Carter
Journal:  Expert Rev Mol Diagn       Date:  2017-09-06       Impact factor: 5.225

8.  Analysis of circulating non-coding RNAs in a non-invasive and cost-effective manner.

Authors:  Yu-Min Wang; Michael Patrick Trinh; Yongzan Zheng; Kaizhu Guo; Luis A Jimenez; Wenwan Zhong
Journal:  Trends Analyt Chem       Date:  2019-07-05       Impact factor: 12.296

9.  Circulating microbial small RNAs are altered in patients with rheumatoid arthritis.

Authors:  Michelle J Ormseth; Qiong Wu; Shilin Zhao; Ryan M Allen; Joseph Solus; Quanhu Sheng; Yan Guo; Fei Ye; Marisol Ramirez-Solano; S Louis Bridges; Jeffrey R Curtis; Kasey Vickers; C Michael Stein
Journal:  Ann Rheum Dis       Date:  2020-09-21       Impact factor: 19.103

10.  A Crosstalk on Codon Usage in Genes Associated with Leukemia.

Authors:  Supriyo Chakraborty; Durbba Nath; Sunanda Paul; Yashmin Choudhury; Yeongseon Ahn; Yoon Shin Cho; Arif Uddin
Journal:  Biochem Genet       Date:  2020-09-28       Impact factor: 1.890

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