Literature DB >> 27207370

Bioimage Informatics for Big Data.

Hanchuan Peng1, Jie Zhou2, Zhi Zhou3, Alessandro Bria4,5, Yujie Li3,6, Dean Mark Kleissas7, Nathan G Drenkow7, Brian Long3, Xiaoxiao Liu3, Hanbo Chen3,6.   

Abstract

Bioimage informatics is a field wherein high-throughput image informatics methods are used to solve challenging scientific problems related to biology and medicine. When the image datasets become larger and more complicated, many conventional image analysis approaches are no longer applicable. Here, we discuss two critical challenges of large-scale bioimage informatics applications, namely, data accessibility and adaptive data analysis. We highlight case studies to show that these challenges can be tackled based on distributed image computing as well as machine learning of image examples in a multidimensional environment.

Mesh:

Year:  2016        PMID: 27207370     DOI: 10.1007/978-3-319-28549-8_10

Source DB:  PubMed          Journal:  Adv Anat Embryol Cell Biol        ISSN: 0301-5556            Impact factor:   1.231


  4 in total

1.  Imagining the future of bioimage analysis.

Authors:  Erik Meijering; Anne E Carpenter; Hanchuan Peng; Fred A Hamprecht; Jean-Christophe Olivo-Marin
Journal:  Nat Biotechnol       Date:  2016-12-07       Impact factor: 54.908

2.  IMACEL: A cloud-based bioimage analysis platform for morphological analysis and image classification.

Authors:  Yuki Shimahara; Ko Sugawara; Kei H Kojo; Hiroki Kawai; Yuya Yoshida; Seiichiro Hasezawa; Natsumaro Kutsuna
Journal:  PLoS One       Date:  2019-02-22       Impact factor: 3.240

3.  Community standards for open cell migration data.

Authors:  Alejandra N Gonzalez-Beltran; Paola Masuzzo; Christophe Ampe; Gert-Jan Bakker; Sébastien Besson; Robert H Eibl; Peter Friedl; Matthias Gunzer; Mark Kittisopikul; Sylvia E Le Dévédec; Simone Leo; Josh Moore; Yael Paran; Jaime Prilusky; Philippe Rocca-Serra; Philippe Roudot; Marc Schuster; Gwendolien Sergeant; Staffan Strömblad; Jason R Swedlow; Merijn van Erp; Marleen Van Troys; Assaf Zaritsky; Susanna-Assunta Sansone; Lennart Martens
Journal:  Gigascience       Date:  2020-05-01       Impact factor: 6.524

Review 4.  Dissecting Neuronal Activation on a Brain-Wide Scale With Immediate Early Genes.

Authors:  Alessandra Franceschini; Irene Costantini; Francesco S Pavone; Ludovico Silvestri
Journal:  Front Neurosci       Date:  2020-10-23       Impact factor: 4.677

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.