| Literature DB >> 27206339 |
Yonghao Zhan1,2,3, Junhao Lin1,3, Yuchen Liu1,2, Mingwei Chen1, Xiaoying Chen1,3, Chengle Zhuang1,3, Li Liu1,3, Wen Xu1, Zhicong Chen1,3, Anbang He1, Qiaoxia Zhang1, Xiaojuan Sun1, Guoping Zhao1,4, Weiren Huang5,6,7.
Abstract
BACKGROUND: Long non-coding RNAs (lncRNAs) have emerged as biomarkers and important regulators of tumor development and progression. PANDAR (promoter of CDKN1A antisense DNA damage activated RNA) is a novel long non-coding RNA that acts as a potential biomarker and involves in development of multiple cancers. However, the clinical significance and molecular mechanism of PANDAR in bladder cancer is still unknown. In this study, we aimed to figure out the role of PANDAR in bladder cancer.Entities:
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Year: 2016 PMID: 27206339 PMCID: PMC4873988 DOI: 10.1186/s13046-016-0354-7
Source DB: PubMed Journal: J Exp Clin Cancer Res ISSN: 0392-9078
Fig. 1The relative expression levels of PANDAR in bladder cancer tissues and bladder cancer cell lines. The relative expression levels of PANDAR were detected using Real-Time qPCR. The heights of the columns in the chart represent the log2-transformed fold changes (bladder cancer tissue/normal bladder tissue) in PANDAR expression in 55 patients with bladder cancer (a). PANDAR expression levels were higher in bladder cancer tissues than that in pair-matched adjacent normal tissues (b and c). PANDAR expression was significantly higher in patients with a higher histological grade and advanced TNM stage (d and e). PANDAR was up-regulated in bladder cancer cell lines compared to normal urothelial cell line SV-HUC-1 (f). Data are shown as mean ± SD
Correlation between PANDAR expression and clinicopathological features of UCB patients
| Parameters Total | Group | Total | PANDAR expression |
| |
|---|---|---|---|---|---|
| High | Low | ||||
| Gender | Male | 40 (73 %) | 27 (49 %) | 13 (24 %) | 0.953 |
| Female | 15 (27 %) | 10 (18 %) | 5 (9 %) | ||
| Age (years) | < 60 | 20 (36 %) | 14 (25 %) | 6 (11 %) | 0.745 |
| ≥ 60 | 35 (64 %) | 23 (42 %) | 12 (22 %) | ||
| Tumor size (cm) | < 3 cm | 21 (38 %) | 11 (20 %) | 10 (18 %) | 0.061 |
| ≥ 3 cm | 34 (62 %) | 26 (47 %) | 8 (15 %) | ||
| Multiplicity | Single | 32 (58 %) | 21 (38 %) | 11 (20 %) | 0.759 |
| Multiple | 23 (42 %) | 16 (29 %) | 7 (13 %) | ||
| Histological grade | G1 | 23 (42 %) | 11 (20 %) | 12 (22 %) | 0.010* |
| G2,G3 | 32 (58 %) | 26 (47 %) | 6 (11 %) | ||
| Tumor stage T | T1,T2 | 38 (69 %) | 22 (40 %) | 16 (29 %) | 0.027* |
| T3,T4 | 17 (31 %) | 15 (27 %) | 2 (4 %) | ||
| Lymph nodes metastasis | NO | 53 (96 %) | 16 (31 %) | 36 (65 %) | 0.607 |
| YES | 2 (4 %) | 1 (2 %) | 1 (2 %) | ||
*P < 0.05 was considered significant (Chi-square test between 2 groups)
Summary of clinicopathological features of tissues of bladder cancer
| Pt No. | Sex | Age | Stage | Grade | Pt No. | Sex | Age | Stage | Grade |
|---|---|---|---|---|---|---|---|---|---|
| 1 | M | 66 | T2bN0M0 | H | 29 | M | 58 | T4aN0M0 | H |
| 2 | M | 53 | T1N0M0 | L | 30 | M | 63 | T2aN0M0 | L |
| 3 | M | 75 | T2bN0M0 | H | 31 | M | 50 | T2bN0M0 | H |
| 4 | F | 64 | T1N0M0 | L | 32 | M | 73 | T3bN0M0 | H |
| 5 | M | 58 | T3aN0M0 | H | 33 | F | 62 | T4aN0M0 | H |
| 6 | M | 65 | T2bN0M0 | H | 34 | M | 41 | T1N0M0 | L |
| 7 | F | 38 | T3aN0M0 | H | 35 | M | 62 | T4aN0M0 | H |
| 8 | M | 59 | T2bN0M0 | H | 36 | M | 76 | T2bN0M0 | L |
| 9 | M | 43 | T3aN0M0 | H | 37 | M | 25 | T1N0M0 | L |
| 10 | F | 64 | T2bN0M0 | H | 38 | F | 74 | T3aN0M0 | H |
| 11 | M | 69 | T1N0M0 | L | 39 | F | 70 | T1N0M0 | L |
| 12 | M | 72 | T3aN0M0 | H | 40 | M | 59 | T4N0M0 | H |
| 13 | F | 89 | T1N0M0 | L | 41 | F | 72 | T1N0M0 | L |
| 14 | M | 68 | T2bN0M0 | H | 42 | M | 46 | T1N0M0 | L |
| 15 | F | 63 | T3aN0M0 | H | 43 | M | 63 | T3aN0M0 | H |
| 16 | M | 63 | T2bN0M0 | H | 44 | M | 86 | T1N0M0 | L |
| 17 | M | 78 | T2aN0M0 | L | 45 | M | 70 | T2bN0M0 | H |
| 18 | M | 70 | T2aN0M0 | L | 46 | M | 49 | T1N0M0 | L |
| 19 | F | 41 | T2aN0M0 | L | 47 | M | 61 | T3aN0M0 | H |
| 20 | M | 59 | T2bN0M0 | H | 48 | M | 53 | T2aN0M0 | L |
| 21 | F | 73 | T2aN0M0 | L | 49 | M | 73 | T2bN1M0 | H |
| 22 | M | 67 | T2bN0M0 | H | 50 | M | 47 | T2aN0M0 | L |
| 23 | F | 61 | T3aN0M0 | H | 51 | M | 77 | T3aN0M0 | H |
| 24 | F | 51 | T1N0M0 | L | 52 | M | 66 | T1N0M0 | L |
| 25 | M | 58 | T4aN3M0 | H | 53 | F | 74 | T2bN0M0 | H |
| 26 | M | 63 | T2aN0M0 | L | 54 | F | 60 | T2aN0M0 | H |
| 27 | M | 57 | T4aN0M0 | H | 55 | M | 68 | T1N0M0 | L |
| 28 | M | 54 | T2bN0M0 | H |
Pt No. patient number; M male; F female; Grade the World Health Organization 2004 classification; H high; L low; Stage the American Joint Committee on Cancer TNM classification
Fig. 2Effects of corresponding siRNA or pcDNA on PANDAR expression. The relative expression level was determined using real-time qPCR. The PANDAR specific siRNA significantly down-regulated the expression level of PANDAR in 5637, SW780, and T24 cells (a). The PANDAR specific pcDNA significantly up-regulated the expression level of PANDAR in 5637, SW780, and T24 cells (b). Data are indicated as mean ± SD
Fig. 3Effects of down-regulation or up-regulation of PANDAR on cell proliferation. Cell proliferation was determined by CCK-8 assay. Cell proliferation inhibition was observed in bladder cancer 5637 cells (a), SW780 cells (b) and T24 cells (c). Cell proliferation promotion was observed in bladder cancer 5637 cells (d), SW780 cells (e) and T24 cells (f). Data are shown as mean ± SD
Fig. 4Effects of down-regulation or up-regulation of PANDAR on cell proliferation. Cell proliferation was also determined by Edu assay. Cell proliferation inhibition was observed in bladder cancer 5637 cells (a and d), SW780 cells (b and d) and T24 cells (c and d). Cell proliferation promotion was observed in bladder cancer 5637 cells (e and h), SW780 cells (f and h) and T24 cells (g and h). Data are shown as mean ± SD
Fig. 5Effects of down-regulation or up-regulation of PANDAR on cell apoptosis. Cell apoptosis was determined by both ELISA assay and Hoechst 33342 staining assay. Induced cell apoptosis by silencing PANDAR was observed in bladder cancer 5637 cells, SW780 cells and T24 cells (a, b and c). Suppressed cell apoptosis by overexpressing PANDAR was observed in bladder cancer 5637 cells, SW780 cells and T24 cells (d, e and f). Data are shown as mean ± SD
Fig. 6Effects of down-regulation or up-regulation of PANDAR on cell apoptosis. Cell apoptosis was also determined by flow cytometry analysis. Induced cell apoptosis by silencing PANDAR was observed in bladder cancer 5637 cells, SW780 cells and T24 cells (a and c). Suppressed cell apoptosis by overexpressing PANDAR was observed in bladder cancer 5637 cells, SW780 cells and T24 cells (b and d). Data are shown as mean ± SD
Fig. 7Effects of down-regulation or up-regulation of PANDAR on cell migration. Cell migration was determined by transwell assay. Inhibited cell migration by silencing PANDAR was observed in 5637, SW780 and T24 cells (a and c). Promoted cell migration by overexpressing PANDAR was observed in 5637, SW780 and T24 cells (b and d). Data are shown as mean ± SD