Literature DB >> 27195612

A Biospecimen Proficiency Testing Program for Biobank Accreditation: Four Years of Experience.

Amélie Gaignaux1, Garry Ashton2, Domenico Coppola3, Yvonne De Souza4, Annemieke De Wilde5, James Eliason6, William Grizzle7, Fiorella Guadagni8, Elaine Gunter9, Iren Koppandi10, Katheryn Shea11, Tim Shi12, Julie A Stein13, Mark E Sobel14, Gunnel Tybring15, Gert Van den Eynden16,17, Fay Betsou1.   

Abstract

Biobanks produce and distribute biospecimens, ensuring their fitness for purpose and accurately qualifying them before distribution. In their efforts toward professionalization, biobanks can nowadays seek certification or accreditation. One of the requirements of these standards is regular participation in Proficiency Testing (PT) programs. An international PT program has been developed and provided to biobanks and other laboratories that perform specific tests to qualify different types of biospecimens. This PT program includes biospecimen testing schemes, as well as biospecimen processing interlaboratory exercises. This PT program supports the development of biobank quality assurance by providing the possibility to assess biobank laboratory performance and useful insights into biobank laboratory method performance characteristics and thus fulfill the demands from accreditation authorities.

Keywords:  accreditation; external quality assessment; method comparison; performance assessment; quality control

Mesh:

Year:  2016        PMID: 27195612      PMCID: PMC6445200          DOI: 10.1089/bio.2015.0108

Source DB:  PubMed          Journal:  Biopreserv Biobank        ISSN: 1947-5543            Impact factor:   2.300


  31 in total

1.  Comparison of the DNA extraction methods for polymerase chain reaction amplification from formalin-fixed and paraffin-embedded tissues.

Authors:  Y Sato; R Sugie; B Tsuchiya; T Kameya; M Natori; K Mukai
Journal:  Diagn Mol Pathol       Date:  2001-12

2.  Evaluation of extraction methods from paraffin wax embedded tissues for PCR amplification of human and viral DNA.

Authors:  P K Chan; D P Chan; K F To; M Y Yu; J L Cheung; A F Cheng
Journal:  J Clin Pathol       Date:  2001-05       Impact factor: 3.411

Review 3.  RNA integrity and the effect on the real-time qRT-PCR performance.

Authors:  Simone Fleige; Michael W Pfaffl
Journal:  Mol Aspects Med       Date:  2006-02-15

4.  Comparison of commercial DNA extraction kits for extraction of bacterial genomic DNA from whole-blood samples.

Authors:  K Smith; M A Diggle; S C Clarke
Journal:  J Clin Microbiol       Date:  2003-06       Impact factor: 5.948

5.  Comparison of automated nucleic acid extraction methods with manual extraction.

Authors:  Nicola Dundas; N Kristine Leos; Midori Mitui; Paula Revell; Beverly Barton Rogers
Journal:  J Mol Diagn       Date:  2008-06-13       Impact factor: 5.568

6.  Comparison of flow cytometry- and microscopy-based methods for measuring micronucleated reticulocyte frequencies in rodents treated with nongenotoxic and genotoxic chemicals.

Authors:  Kristine L Witt; Elizabeth Livanos; Grace E Kissling; Dorothea K Torous; William Caspary; Raymond R Tice; Leslie Recio
Journal:  Mutat Res       Date:  2007-08-11       Impact factor: 2.433

Review 7.  DNA, RNA, and protein extraction: the past and the present.

Authors:  Siun Chee Tan; Beow Chin Yiap
Journal:  J Biomed Biotechnol       Date:  2009

8.  Observational study on variability between biobanks in the estimation of DNA concentration.

Authors:  Jay Brown; Alexander N Donev; Charalampos Aslanidis; Pippa Bracegirdle; Katherine P Dixon; Manuela Foedinger; Rhian Gwilliam; Matthew Hardy; Thomas Illig; Xiayi Ke; Dagni Krinka; Camilla Lagerberg; Päivi Laiho; David H Lewis; Wendy McArdle; Simon Patton; Susan M Ring; Gerd Schmitz; Helen Stevens; Gunnel Tybring; H Erich Wichmann; William E R Ollier; Martin A Yuille
Journal:  BMC Res Notes       Date:  2009-10-13

9.  The isolation of nucleic acids from fixed, paraffin-embedded tissues-which methods are useful when?

Authors:  M Thomas P Gilbert; Tamara Haselkorn; Michael Bunce; Juan J Sanchez; Sebastian B Lucas; Laurence D Jewell; Eric Van Marck; Michael Worobey
Journal:  PLoS One       Date:  2007-06-20       Impact factor: 3.240

10.  Performance of high-throughput DNA quantification methods.

Authors:  Kashif A Haque; Ruth M Pfeiffer; Michael B Beerman; Jeff P Struewing; Stephen J Chanock; Andrew W Bergen
Journal:  BMC Biotechnol       Date:  2003-10-28       Impact factor: 2.563

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  4 in total

1.  Biobanking in the COVID-19 Era and Beyond: Part 2. A Set of Tool Implementation Case Studies.

Authors:  Clare M Allocca; Emma Snapes; Monique Albert; Marianna J Bledsoe; Marta G Castelhano; Mieke De Wilde; Koh Furuta; Zisis Kozlakidis; Dunja Martin; Anabela Martins; Shannon J McCall; Brent Schacter
Journal:  Biopreserv Biobank       Date:  2020-11-18       Impact factor: 2.300

2.  Driving innovation through collaboration: development of clinical annotation datasets for brain cancer biobanking.

Authors:  Craig Gedye; Mythily Sachchithananthan; Robyn Leonard; Rosalind L Jeffree; Michael E Buckland; David S Ziegler; Manuel B Graeber; Bryan W Day; Kerrie L McDonald; Arian Lasocki; Anna K Nowak
Journal:  Neurooncol Pract       Date:  2019-08-27

3.  Interlaboratory proficiency processing scheme in CSF aliquoting: implementation and assessment based on biomarkers of Alzheimer's disease.

Authors:  Piotr Lewczuk; Amélie Gaignaux; Olga Kofanova; Natalia Ermann; Fay Betsou; Sebastian Brandner; Barbara Mroczko; Kaj Blennow; Dominik Strapagiel; Silvia Paciotti; Jonathan Vogelgsang; Michael H Roehrl; Sandra Mendoza; Johannes Kornhuber; Charlotte Teunissen
Journal:  Alzheimers Res Ther       Date:  2018-08-28       Impact factor: 6.982

4.  Raising to the Challenge: Building a Federated Biobank to Accelerate Translational Research-The University Biobank Limburg.

Authors:  Loes Linsen; Kimberly Vanhees; Evi Vanoppen; Kim Ulenaers; Suzanne Driessens; Joris Penders; Veerle Somers; Piet Stinissen; Jean-Luc Rummens
Journal:  Front Med (Lausanne)       Date:  2019-10-22
  4 in total

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