Literature DB >> 27187571

Spatial segregation of heterochromatin: Uncovering functionality in a multicellular organism.

Daphne S Cabianca1, Susan M Gasser1,2.   

Abstract

Multiple layers of regulation are required to ensure appropriate patterns of gene expression for accurate cell differentiation. Interphase chromatin is non-randomly distributed within the nucleus, with highly compacted, transcriptionally silent heterochromatin enriched at the nuclear and nucleolar periphery. Whether this spatial organization serves a function in organismal physiology, rather than simply being a byproduct of chromatin metabolism, is a fundamental question. Recent work performed in C. elegans embryos characterized the molecular mechanisms that drive the perinuclear anchoring of heterochromatin. Moreover, for the first time it was shown that heterochromatin sequestration helps to restrict cell differentiation programs, while sustaining commitment to a specified fate. Here, we describe and comment on these findings, placing them in a broader context.

Entities:  

Keywords:  C. elegans; CEC-4; H3K9 methylation; Heterochromatin; cell fate; nuclear periphery

Mesh:

Substances:

Year:  2016        PMID: 27187571      PMCID: PMC4991237          DOI: 10.1080/19491034.2016.1187354

Source DB:  PubMed          Journal:  Nucleus        ISSN: 1949-1034            Impact factor:   4.197


  34 in total

1.  Subnuclear compartmentalization of immunoglobulin loci during lymphocyte development.

Authors:  Steven T Kosak; Jane A Skok; Kay L Medina; Roy Riblet; Michelle M Le Beau; Amanda G Fisher; Harinder Singh
Journal:  Science       Date:  2002-04-05       Impact factor: 47.728

2.  DNA sequence-dependent compartmentalization and silencing of chromatin at the nuclear lamina.

Authors:  Joseph M Zullo; Ignacio A Demarco; Roger Piqué-Regi; Daniel J Gaffney; Charles B Epstein; Chauncey J Spooner; Teresa R Luperchio; Bradley E Bernstein; Jonathan K Pritchard; Karen L Reddy; Harinder Singh
Journal:  Cell       Date:  2012-06-22       Impact factor: 41.582

Review 3.  Lamin-binding Proteins.

Authors:  Katherine L Wilson; Roland Foisner
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-02-17       Impact factor: 10.005

4.  Sites that direct nuclear compartmentalization are near the 5' end of the mouse immunoglobulin heavy-chain locus.

Authors:  Qiaoxin Yang; Roy Riblet; Carl L Schildkraut
Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

5.  Lamin B receptor recognizes specific modifications of histone H4 in heterochromatin formation.

Authors:  Yasuhiro Hirano; Kohji Hizume; Hiroshi Kimura; Kunio Takeyasu; Tokuko Haraguchi; Yasushi Hiraoka
Journal:  J Biol Chem       Date:  2012-10-25       Impact factor: 5.157

6.  Neural induction promotes large-scale chromatin reorganisation of the Mash1 locus.

Authors:  Ruth R E Williams; Véronique Azuara; Pascale Perry; Stephan Sauer; Maria Dvorkina; Helle Jørgensen; Jeffery Roix; Philip McQueen; Tom Misteli; Matthias Merkenschlager; Amanda G Fisher
Journal:  J Cell Sci       Date:  2006-01-01       Impact factor: 5.285

7.  Specific nuclear envelope transmembrane proteins can promote the location of chromosomes to and from the nuclear periphery.

Authors:  Nikolaj Zuleger; Shelagh Boyle; David A Kelly; Jose I de las Heras; Vassiliki Lazou; Nadia Korfali; Dzmitry G Batrakou; K Natalie Randles; Glenn E Morris; David J Harrison; Wendy A Bickmore; Eric C Schirmer
Journal:  Genome Biol       Date:  2013-02-15       Impact factor: 13.583

8.  Directed targeting of chromatin to the nuclear lamina is mediated by chromatin state and A-type lamins.

Authors:  Jennifer C Harr; Teresa Romeo Luperchio; Xianrong Wong; Erez Cohen; Sarah J Wheelan; Karen L Reddy
Journal:  J Cell Biol       Date:  2015-01-05       Impact factor: 10.539

9.  Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells.

Authors:  Bo Wen; Hao Wu; Yoichi Shinkai; Rafael A Irizarry; Andrew P Feinberg
Journal:  Nat Genet       Date:  2009-01-18       Impact factor: 38.330

10.  Recruitment to the nuclear periphery can alter expression of genes in human cells.

Authors:  Lee E Finlan; Duncan Sproul; Inga Thomson; Shelagh Boyle; Elizabeth Kerr; Paul Perry; Bauke Ylstra; Jonathan R Chubb; Wendy A Bickmore
Journal:  PLoS Genet       Date:  2008-03-21       Impact factor: 5.917

View more
  12 in total

1.  Vigilin protein Vgl1 is required for heterochromatin-mediated gene silencing in Schizosaccharomyces pombe.

Authors:  Zeenat Farooq; Ehsaan Abdullah; Shahid Banday; Shabir Ahmad Ganai; Romana Rashid; Arjamand Mushtaq; Samia Rashid; Mohammad Altaf
Journal:  J Biol Chem       Date:  2019-09-25       Impact factor: 5.157

2.  Pericentromere clustering in Tradescantia section Rhoeo involves self-associations of AT- and GC-rich heterochromatin fractions, is developmentally regulated, and increases during differentiation.

Authors:  Hieronim Golczyk; Arleta Limanówka; Anna Uchman-Książek
Journal:  Chromosoma       Date:  2020-07-17       Impact factor: 4.316

3.  Pivotal roles of PCNA loading and unloading in heterochromatin function.

Authors:  Ryan Janke; Grant A King; Martin Kupiec; Jasper Rine
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-13       Impact factor: 11.205

4.  Native Chromatin Proteomics Reveals a Role for Specific Nucleoporins in Heterochromatin Organization and Maintenance.

Authors:  Nahid Iglesias; Joao A Paulo; Antonis Tatarakis; Xiaoyi Wang; Amanda L Edwards; Natarajan V Bhanu; Benjamin A Garcia; Wilhelm Haas; Steven P Gygi; Danesh Moazed
Journal:  Mol Cell       Date:  2019-11-26       Impact factor: 17.970

Review 5.  The role of transcription in shaping the spatial organization of the genome.

Authors:  Bas van Steensel; Eileen E M Furlong
Journal:  Nat Rev Mol Cell Biol       Date:  2019-06       Impact factor: 94.444

Review 6.  The nuclear pore complex and the genome: organizing and regulatory principles.

Authors:  Pau Pascual-Garcia; Maya Capelson
Journal:  Curr Opin Genet Dev       Date:  2021-02-06       Impact factor: 5.578

7.  Structural insights into chromosome attachment to the nuclear envelope by an inner nuclear membrane protein Bqt4 in fission yeast.

Authors:  Chunyi Hu; Haruna Inoue; Wenqi Sun; Yumiko Takeshita; Yaoguang Huang; Ying Xu; Junko Kanoh; Yong Chen
Journal:  Nucleic Acids Res       Date:  2019-02-20       Impact factor: 16.971

Review 8.  KDM2A/B lysine demethylases and their alternative isoforms in development and disease.

Authors:  Tomáš Vacík; Dijana Lađinović; Ivan Raška
Journal:  Nucleus       Date:  2018       Impact factor: 4.197

9.  The mre11 A470 alleles influence the hereditability and the segregation of telosomes in Saccharomyces cerevisiae.

Authors:  In-Joon Baek; Daniel S Moss; Arthur J Lustig
Journal:  PLoS One       Date:  2017-09-08       Impact factor: 3.240

10.  The large fraction of heterochromatin in Drosophila neurons is bound by both B-type lamin and HP1a.

Authors:  Alexey V Pindyurin; Artem A Ilyin; Anton V Ivankin; Mikhail V Tselebrovsky; Valentina V Nenasheva; Elena A Mikhaleva; Ludo Pagie; Bas van Steensel; Yuri Y Shevelyov
Journal:  Epigenetics Chromatin       Date:  2018-11-01       Impact factor: 4.954

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.