| Literature DB >> 27186534 |
Zahra Ghanian1, Kevin Staniszewski1, Nasim Jamali2, Reyhaneh Sepehr1, Shoujian Wang2, Christine M Sorenson3, Nader Sheibani4, Mahsa Ranji5.
Abstract
A multi-parameter quantification method was implemented to quantify retinal vascular injuries in microscopic images of clinically relevant eye diseases. This method was applied to wholemount retinal trypsin digest images of diabetic Akita/+, and bcl-2 knocked out mice models. Five unique features of retinal vasculature were extracted to monitor early structural changes and retinopathy, as well as quantifying the disease progression. Our approach was validated through simulations of retinal images. Results showed fewer number of cells (P = 5.1205e-05), greater population ratios of endothelial cells to pericytes (PCs) (P = 5.1772e-04; an indicator of PC loss), higher fractal dimension (P = 8.2202e-05), smaller vessel coverage (P = 1.4214e-05), and greater number of acellular capillaries (P = 7.0414e-04) for diabetic retina as compared to normal retina. Quantification using the present method would be helpful in evaluating physiological and pathological retinopathy in a high-throughput and reproducible manner.Entities:
Keywords: Classification; fluorescence microscopy; fractals; image cytometry; retinopathy; segmentation
Year: 2016 PMID: 27186534 PMCID: PMC4855887
Source DB: PubMed Journal: J Med Signals Sens ISSN: 2228-7477
Figure 1Fundus camera and microscopy images of retina. Top: A fluorescein angiogram of mouse eye using a fundus camera (scale bar represents 100 μm). Middle and Bottom: Microscopy vasculature and cell nuclei images acquired from wholemount retinal trypsin digest used in this study to detect changes in retinal vasculature and vascular cells (scale bar represents 15 μm)
Figure 2(a) Flowchart of the cell segmentation procedure. (b) Output of the segmentation algorithm in different stages
Accuracy of the cell count and cell type determinations for 16 fields of views of images from four 11-month-old wild-type mice
Figure 3Acellular capillary detection: (a) vasculature image (b) binary image of vasculature (c) morphological thinning of vasculature used to determine vessel caliber (d) marked connected areas with a width <40% of the average vessel's caliber
Figure 4(a) Left: cell images represent that 11-month-old diabetic retina has a fewer number of cell compared to the normal retina at the same age. Right: vasculature images demonstrate lower vessel coverage and larger number of acellular capillaries (shown by arrows) in diabetic retina as compared to control (scale bars represent 20 μm). (b) Bar graph plot comparing five unique features in diabetic retina versus normal retina from 11-month-old mice. Bar graphs show the mean values and standard errors of each feature detected in retinas. Diabetic retinopathy resulted in significant decrease statistically in the total number of vascular cells, and vessel coverage while increase significantly the EC/PC ratio, number of acellular capillaries and fractal dimension. Please note that the total number of cells and vessel coverage were scaled by 10−1 and 10−5, respectively. For showing the difference between the fractal dimensions of the two groups, this parameter was presented with different y-axis on the right. The number of the fields of view in each group of retina is 16
Performance of the support vector machine classifier for different groups under study
Figure 5Results of the classification using support vector machine method in retinas from (a) 6 weeks bcl-2−/− deficient and WT mice considering two features: Cell count and vessel coverage (b) 6 months diabetic Akita/+ and WT mice with three features: Cell count, vessel coverage, and EC/PC ratio; Red crosses correspond to injured retinas and green stars are related to control. The boundary between yellow (injured) and blue (normal) regions is one of the classifiers