Literature DB >> 27181501

Three-step channel conformational changes common to DNA packaging motors of bacterial viruses T3, T4, SPP1, and Phi29.

Shaoying Wang1, Zhouxiang Ji1, Erfu Yan2, Farzin Haque1, Peixuan Guo3.   

Abstract

The DNA packaging motor of dsDNA bacterial viruses contains a head-tail connector with a channel for the genome to enter during assembly and to exit during host infection. The DNA packaging motor of bacterial virus phi29 was recently reported to use the "One-way revolving" mechanism for DNA packaging. This raises a question of how dsDNA is ejected during infection if the channel acts as a one-way inward valve. Here we report a three step conformational change of the portal channel that is common among DNA translocation motors of bacterial viruses T3, T4, SPP1, and phi29. The channels of these motors exercise three discrete steps of gating, as revealed by electrophysiological assays. The data suggest that the three step channel conformational changes occur during DNA entry process, resulting in a structural transition in preparation for DNA movement in the reverse direction during ejection. Copyright Â
© 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Biomotor; Nano channel; Nanobiotechnology; Nanomotor; Nanopore; Nanotechnology; Single channel conductance; Viral assembly

Mesh:

Substances:

Year:  2016        PMID: 27181501      PMCID: PMC5107171          DOI: 10.1016/j.virol.2016.04.015

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  40 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-11       Impact factor: 11.205

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  6 in total

1.  Nano-channel of viral DNA packaging motor as single pore to differentiate peptides with single amino acid difference.

Authors:  Zhouxiang Ji; Xinqi Kang; Shaoying Wang; Peixuan Guo
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2.  Channel of viral DNA packaging motor for real time kinetic analysis of peptide oxidation states.

Authors:  Shaoying Wang; Zhi Zhou; Zhengyi Zhao; Hui Zhang; Farzin Haque; Peixuan Guo
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3.  Oriented single directional insertion of nanochannel of bacteriophage SPP1 DNA packaging motor into lipid bilayer via polar hydrophobicity.

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Review 6.  Breaking Symmetry in Viral Icosahedral Capsids as Seen through the Lenses of X-ray Crystallography and Cryo-Electron Microscopy.

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  6 in total

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