Literature DB >> 27529454

Oriented single directional insertion of nanochannel of bacteriophage SPP1 DNA packaging motor into lipid bilayer via polar hydrophobicity.

Zhi Zhou1, Zhouxiang Ji1, Shaoying Wang1, Farzin Haque1, Peixuan Guo2.   

Abstract

Insertion of biological nanopore into artificial membrane is of fundamental importance in nanotechnology. Many applications require control and knowledge of channel orientation. In this work, the insertion orientation of the bacteriophage SPP1 and phi29 DNA packaging motors into lipid membranes was investigated. Single molecule electrophysiological assays and Ni-NTA-nanogold binding assays revealed that both SPP1 and phi29 motor channels exhibited a one-way traffic property for TAT peptide translocation from N- to C-termini of the protein channels. SPP1 motor channels preferentially inserts into liposomes with their C-terminal wider region facing inward. Changing the hydrophobicity of the N- or C-termini of phi29 connector alters the insertion orientation, suggesting that the hydrophobicity and hydrophilicity of the termini of the protein channel governs the orientation of the insertion into lipid membrane. It is proposed that the specificity in motor channel orientation is a result of the hydrophilic/hydrophobic interaction at the air/water interface when the protein channels are incorporating into liposome membranes.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Nanobiotechnology; Nanopore; Single pore DNA sequencing; Single pore sensing; Viral DNA packaging motor; Viral assembly

Mesh:

Substances:

Year:  2016        PMID: 27529454      PMCID: PMC5102265          DOI: 10.1016/j.biomaterials.2016.08.002

Source DB:  PubMed          Journal:  Biomaterials        ISSN: 0142-9612            Impact factor:   12.479


  40 in total

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Journal:  J Mol Biol       Date:  2002-01-25       Impact factor: 5.469

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Journal:  Nanomedicine       Date:  2008-01-16       Impact factor: 5.307

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  7 in total

Review 1.  High bandwidth approaches in nanopore and ion channel recordings - A tutorial review.

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Journal:  Anal Chim Acta       Date:  2019-01-25       Impact factor: 6.558

2.  Channel from bacterial virus T7 DNA packaging motor for the differentiation of peptides composed of a mixture of acidic and basic amino acids.

Authors:  Zhouxiang Ji; Peixuan Guo
Journal:  Biomaterials       Date:  2019-05-21       Impact factor: 12.479

3.  Nano-channel of viral DNA packaging motor as single pore to differentiate peptides with single amino acid difference.

Authors:  Zhouxiang Ji; Xinqi Kang; Shaoying Wang; Peixuan Guo
Journal:  Biomaterials       Date:  2018-08-03       Impact factor: 12.479

4.  Porphyrin-Assisted Docking of a Thermophage Portal Protein into Lipid Bilayers: Nanopore Engineering and Characterization.

Authors:  Benjamin Cressiot; Sandra J Greive; Wei Si; Tomas C Pascoa; Mehrnaz Mojtabavi; Maria Chechik; Huw T Jenkins; Xueguang Lu; Ke Zhang; Aleksei Aksimentiev; Alfred A Antson; Meni Wanunu
Journal:  ACS Nano       Date:  2017-11-15       Impact factor: 15.881

5.  Channel of viral DNA packaging motor for real time kinetic analysis of peptide oxidation states.

Authors:  Shaoying Wang; Zhi Zhou; Zhengyi Zhao; Hui Zhang; Farzin Haque; Peixuan Guo
Journal:  Biomaterials       Date:  2017-01-30       Impact factor: 12.479

Review 6.  Recent advances in integrated solid-state nanopore sensors.

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  7 in total

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