Literature DB >> 27177350

Gene expression in Kinetoplastids.

C E Clayton1.   

Abstract

Kinetoplastid parasites adapt to different environments with wide-reaching control of gene expression, but transcription of nuclear protein-coding genes is polycistronic: there is no individual control of transcription initiation. Mature mRNAs are made by co-transcriptional trans splicing and polyadenylation, and competition between processing and nuclear degradation may contribute to regulation of mRNA levels. In the cytosol both the extent to which mRNAs are translated, and mRNA decay rates, vary enormously. I here highlight gaps in our knowledge: no measurements of transcription initiation or elongation rates; no measurements of how, precisely, mRNA processing and nuclear degradation control mRNA levels; and extremely limited understanding of the contributions of different translation initiation factors and RNA-binding proteins to mRNA fate.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27177350     DOI: 10.1016/j.mib.2016.04.018

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  70 in total

1.  A unified approach towards Trypanosoma brucei functional genomics using Gibson assembly.

Authors:  Michael R McAllaster; Amy N Sinclair-Davis; Nicholas A Hilton; Christopher L de Graffenried
Journal:  Mol Biochem Parasitol       Date:  2016-08-03       Impact factor: 1.759

Review 2.  ChIP-ping the branches of the tree: functional genomics and the evolution of eukaryotic gene regulation.

Authors:  Georgi K Marinov; Anshul Kundaje
Journal:  Brief Funct Genomics       Date:  2018-03-01       Impact factor: 4.241

3.  Steric constraints control processing of glycosylphosphatidylinositol anchors in Trypanosoma brucei.

Authors:  Carolina M Koeller; Calvin Tiengwe; Kevin J Schwartz; James D Bangs
Journal:  J Biol Chem       Date:  2020-01-13       Impact factor: 5.157

4.  Structural Basis of Protein Arginine Methyltransferase Activation by a Catalytically Dead Homolog (Prozyme).

Authors:  Hideharu Hashimoto; Lucie Kafková; Ashleigh Raczkowski; Kelsey D Jordan; Laurie K Read; Erik W Debler
Journal:  J Mol Biol       Date:  2019-11-11       Impact factor: 5.469

5.  Phosphorylation and interactions associated with the control of the Leishmania Poly-A Binding Protein 1 (PABP1) function during translation initiation.

Authors:  Osvaldo P de Melo Neto; Tamara D C da Costa Lima; Kleison C Merlo; Tatiany P Romão; Pollyanna O Rocha; Ludmila A Assis; Larissa M Nascimento; Camila C Xavier; Antonio M Rezende; Christian R S Reis; Barbara Papadopoulou
Journal:  RNA Biol       Date:  2018-03-23       Impact factor: 4.652

Review 6.  Evolution of Antigenic Variation in African Trypanosomes: Variant Surface Glycoprotein Expression, Structure, and Function.

Authors:  James D Bangs
Journal:  Bioessays       Date:  2018-10-29       Impact factor: 4.345

7.  Trypanosoma brucei RRP44 is involved in an early stage of large ribosomal subunit RNA maturation.

Authors:  Giovanna Cesaro; Flávia Raquel Gonçalves Carneiro; Andréa Rodrigues Ávila; Nilson Ivo Tonin Zanchin; Beatriz Gomes Guimarães
Journal:  RNA Biol       Date:  2019-01-07       Impact factor: 4.652

Review 8.  Euglenozoa: taxonomy, diversity and ecology, symbioses and viruses.

Authors:  Alexei Y Kostygov; Anna Karnkowska; Jan Votýpka; Daria Tashyreva; Kacper Maciszewski; Vyacheslav Yurchenko; Julius Lukeš
Journal:  Open Biol       Date:  2021-03-10       Impact factor: 6.411

9.  Clinical and veterinary trypanocidal benzoxaboroles target CPSF3.

Authors:  Richard J Wall; Eva Rico; Iva Lukac; Fabio Zuccotto; Sara Elg; Ian H Gilbert; Yvonne Freund; M R K Alley; Mark C Field; Susan Wyllie; David Horn
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-05       Impact factor: 11.205

Review 10.  Arginine Methyltransferases as Regulators of RNA-Binding Protein Activities in Pathogenic Kinetoplastids.

Authors:  Gustavo D Campagnaro; Edward Nay; Michael J Plevin; Angela K Cruz; Pegine B Walrad
Journal:  Front Mol Biosci       Date:  2021-06-11
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