Literature DB >> 27177294

Membrane proteome profiling of Mentha arvensis leaves in response to Alternaria alternata infection identifies crucial candidates for defense response.

Riddhi Datta1, Deepak Kumar1, Sharmila Chattopadhyay1.   

Abstract

The leaf spot disease of Mentha arvensis, caused by Alternaria alternata, is a devastating foliar disease worldwide and leads to considerable economic losses. In this investigation, 2-dimensional gel electrophoresis (2-DE) was used to identify the membrane proteins potentially involved in M. arvensis - A. alternata interaction. Membrane proteins, isolated from leaves of control and infected plants, were analyzed by 2-DE and identified using mass spectrometry (MALDI TOF-TOF MS/MS). Our analysis identified 21 differentially expressed membrane proteins including several interesting receptors and channel proteins. Of these identified proteins, 34% were found to be involved in plant defense responses. Leucine-rich repeat family protein/ protein kinase family protein which plays critical role in stress response and nucleotide-binding site-leucine-rich repeat (NBS-LRR) which is involved in detecting the advent of pathogen on plant surface were identified to be up-regulated in our study. Interestingly, AKT1-like potassium channel protein which is known to play a crucial role in maintaining ion homeostasis within the cell was also upregulated in the infected sample. In addition, ADP ribolysation factor (ARF)-GTPase activating domain containing protein, a membrane trafficking protein, was also up-regulated in the current study. Protein-protein interaction network analysis followed by functional enrichment revealed that transmembrane ion transport-related proteins represented a major class in this network followed by nucleic acid binding proteins and proteins with kinase activities respectively. Together, our investigation identified several key defense-related proteins which are crucial sensors for detecting pathogen invasion and can serve as a potential resource to understand disease resistance mechanism in mint.

Entities:  

Keywords:  2-dimensional gel electrophoresis; Alternaria alternata; infection; membrane proteomics; mentha arvensis

Mesh:

Substances:

Year:  2018        PMID: 27177294      PMCID: PMC5933920          DOI: 10.1080/15592324.2016.1178423

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  38 in total

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Authors:  M Kanehisa; S Goto
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Structure-function analysis of the plasma membrane- localized Arabidopsis defense component ACD6.

Authors:  Hua Lu; Yang Liu; Jean T Greenberg
Journal:  Plant J       Date:  2005-12       Impact factor: 6.417

Review 3.  Membrane trafficking and autophagy in pathogen-triggered cell death and immunity.

Authors:  Ooi-Kock Teh; Daniel Hofius
Journal:  J Exp Bot       Date:  2014-01-13       Impact factor: 6.992

4.  The focusing positions of polypeptides in immobilized pH gradients can be predicted from their amino acid sequences.

Authors:  B Bjellqvist; G J Hughes; C Pasquali; N Paquet; F Ravier; J C Sanchez; S Frutiger; D Hochstrasser
Journal:  Electrophoresis       Date:  1993-10       Impact factor: 3.535

5.  Proteomics of rice and Cochliobolus miyabeanus fungal interaction: insight into proteins at intracellular and extracellular spaces.

Authors:  Jin Yeong Kim; Jingni Wu; Soon Jae Kwon; Haram Oh; So Eui Lee; Sang Gon Kim; Yiming Wang; Ganesh Kumar Agrawal; Randeep Rakwal; Kyu Young Kang; Il-Pyung Ahn; Beom-Gi Kim; Sun Tae Kim
Journal:  Proteomics       Date:  2014-08-21       Impact factor: 3.984

6.  Changes in the leaf proteome profile of Mentha arvensis in response to Alternaria alternata infection.

Authors:  Ragini Sinha; Sharmila Chattopadhyay
Journal:  J Proteomics       Date:  2010-11-23       Impact factor: 4.044

7.  Proteomic profiling of γ-ECS overexpressed transgenic Nicotiana in response to drought stress.

Authors:  Deepak Kumar; Riddhi Datta; Ragini Sinha; Aparupa Ghosh; Sharmila Chattopadhyay
Journal:  Plant Signal Behav       Date:  2014

8.  A critical evaluation of sample extraction techniques for enhanced proteomic analysis of recalcitrant plant tissues.

Authors:  Ramu S Saravanan; Jocelyn K C Rose
Journal:  Proteomics       Date:  2004-09       Impact factor: 3.984

9.  The ankyrin-repeat transmembrane protein BDA1 functions downstream of the receptor-like protein SNC2 to regulate plant immunity.

Authors:  Yuanai Yang; Yaxi Zhang; Pingtao Ding; Kaeli Johnson; Xin Li; Yuelin Zhang
Journal:  Plant Physiol       Date:  2012-06-27       Impact factor: 8.340

10.  Genome-wide identification, characterization and expression analysis of populus leucine-rich repeat receptor-like protein kinase genes.

Authors:  Yanjun Zan; Yan Ji; Yu Zhang; Shaohui Yang; Yingjin Song; Jiehua Wang
Journal:  BMC Genomics       Date:  2013-05-10       Impact factor: 3.969

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