| Literature DB >> 27176039 |
Daniel F Garcia1,2, José S Camelo3, Greice A Molfetta1,2,4, Marlene Turcato5, Carolina F M Souza6, Gilda Porta7, Carlos E Steiner8, Wilson A Silva9,10,11.
Abstract
BACKGROUND: Classical Galactosemia (CG) is an inborn error of galactose metabolism caused by the deficiency of the galactose-1-phosphate uridyltransferase enzyme. It is transmitted as an autosomal recessive disease and is typically characterized by neonatal galactose intolerance, with complications ranging from neonatal jaundice and liver failure to late complications, such as motor and reproductive dysfunctions. Galactosemia is also heterogeneous from a molecular standpoint, with hundreds of different mutations described in the GALT gene, some of them specific to certain populations, reflecting consequence of founder effect.Entities:
Keywords: GALT; Inborn error of galactose metabolism; Mutation screening
Mesh:
Substances:
Year: 2016 PMID: 27176039 PMCID: PMC4866286 DOI: 10.1186/s12881-016-0300-8
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Clinical summary of patients with galactosemia and results of GALT enzyme activity assay, and genotyping
| Age at diagnosis | Age at last evaluation | Hepatomegaly | Jaundice | Vomiting | Failure to thrieve | Cataracts | Hemolytic anemia | Ataxia/Ovarian failure | GALT activity (μmol/h/g Hb) |
| Diagnosis | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2 m | 4y | + | + | + | + | - | + | - | Undetectable | p.Q188R/p.Q188R | Classical galactosemia |
| 2 | 2 m | 10 m | + | + | + | + | - | - | - | 5.0 | p.Q188R/p.Q188R | Classical galactosemia |
| 3 | 1 m | 12 m | + | + | - | - | - | - | - | 3.1 | p.Q188R/p.Q188R | Classical galactosemia |
| 4 | 4 m | 5 m | + | + | - | - | - | - | - | 1.5 | p.Q188R/p.Q188R | Classical galactosemia |
| 5 | 1 m | 2 m | + | + | + | - | + | - | - | 14.5 | p.Q188R/p.K285N | Classical galactosemia |
| 6 | 1½ m | 5y | + | + | - | + | - | - | - | 11.0 |
| Classical galactosemia |
| 7 | 1 m | 16 m | + | + | + | + | - | - | - | Undetectable |
| Classical galactosemia |
| 8 | NS | 2y | - | + | - | + | - | - | - | 13.3 |
| Classical galactosemia |
| 9 | ½ m | 12 m | + | + | + | + | - | - | - | Undetectable |
| Classical galactosemia |
| 10 | 2 m | 4y | + | - | + | + | - | - | - | Undetectable | p.S135L/p.Q188R | Classical galactosemia |
| 11 | 1 m | 3y | + | + | + | - | + | - | - | Undetectable | p.S135L/p.Q188R | Classical galactosemia |
| 12 | NS | 5 m | - | + | - | + | - | + | - | Undetectable | p.S135L/p.G175D | Classical galactosemia |
| 13 | 4½ m | 4y | + | + | - | - | + | + | - | Undetectable | p.S135L/p.K285N | Classical galactosemia |
| 14 | 2 m | 2 m | + | + | - | + | - | - | - | Undetectable | p.S135L/p.L275fs | Classical galactosemia |
| 15 | 1 m | 3 m | + | - | + | + | - | - | - | Undetectable | p.S135L/p.F171S | Classical galactosemia |
| 16* | 2 m | 3 m¢ | + | + | - | + | + | - | - | 1.5 |
| Classical galactosemia |
| 17* | 1 m | 5y | + | - | - | + | - | + | - | 1.0 |
| Classical galactosemia |
| 18 | 3 m | 2y | + | + | + | + | - | - | - | 12.0 | p.R33H/p.S135L | Classical galactosemia |
| 19 | 1½ m | 3y | + | + | + | + | + | + | - | Undetectable |
| Classical galactosemia |
| 20 | NS | 10 m | - | - | - | - | - | - | - | 3.0 |
| Duarte galactosemia |
| 21 | 2 m | 3 m | - | + | - | - | - | - | - | 10.0 | p.G175D/N314D§ | Duarte galactosemia |
| 22# | NS | 5 m | - | - | - | - | - | - | - | 13.0 | p.R204X/N314D§ | Duarte galactosemia |
| 23# | NS | 17 m | - | - | - | - | - | - | - | 19.0 | p.R204X/N314D§ | Duarte galactosemia |
| 24 | NS | 4 m | - | - | - | - | - | - | - | 29.0 | p.Q188R/N314D§ | Duarte galactosemia |
| 25 | NS | 2 m | - | - | - | - | - | - | - | 29.8 |
| Duarte galactosemia |
| 26 | 3 m | 4y | + | - | - | - | - | - | - | 7.0 | p.H132Y/p.T292Tp.H315H | Galactosemia allele carrier |
| 27 | NS | 3 m | - | - | - | - | - | - | - | 13.0 | p.I170I/p.Q188R | Galactosemia allele carrier |
| 28 | 48y | 48y | - | - | - | - | - | - | + | 21.0 |
| Galactosemia allele carrier |
| 29 | 2 m | 28 m | - | - | - | - | - | - | - | 33.0 | WT/p.P325L | Galactosemia allele carrier |
| 30@ | NS | 3 m | - | - | - | - | - | - | - | 47.0 | WT/WT | Galactosemia type 2 |
NS = Newborn screening; m = months; y = years; *sip pair, #sib pair, ¢died at 3 month of age
§ = Duarte allele: c.-119_-116delCAGT + c.508-24G > A + c507 + 62G > A + N314D
@GALK1 genotype: c.166-5_c.227dup67 and c.766C > T (p.R256W)
New mutations are indicated in bold
GALT mutations in the Brazilian patients with galactosemia
| Region | nucleotide change | Mutation type | Amino Acid | Damage Prediction by SIFT | Damage Prediction by Polyphen-2 | Classification@ | Relative allele frequency | References |
|---|---|---|---|---|---|---|---|---|
| 5′UTR | -119_-116delCAGT* | deletion | --- | --- | --- | Benign (Duarte 2) | 0,08 | Berry GT et al., 2001 [ |
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| Exon 2 | c.98G > A | missense | R33H | DAMAGING | DAMAGING | Pathogenic | 0,01 | Gort L et al., 2006 [ |
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| Exon 5 | c.394C > T | missense | H132Y | DAMAGING | DAMAGING | Pathogenic | 0,01 | Elsas LJ et al., 1998 [ |
| Exon 5 | c.404C > T | missense | S135L | DAMAGING | DAMAGING | Pathogenic | 0,12 | Reichardt JK et al., 1992 [ |
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| Intron 5 | c.508-24G > A* | polymorphism | --- | --- | --- | Benign | 0,08 | Kozak L et al., 2000 [ |
| Intron 5 | c.507 + 62G > A* | polymorphism | --- | --- | --- | Benign | 0,08 | Kozak L et al., 2000 [ |
| Exon 6 | c.510C > A | silent | I170I | TOLERATED | TOLERATED | Translationally silent | 0,01 | Item C et al., 2002 [ |
| Exon 6 | c.512 T > C | missense | F171S | DAMAGING | DAMAGING | Pathogenic | 0,01 | Reichardt JK et al., 1992 [ |
| Exon 6 | c.524G > A | missense | G175D | DAMAGING | DAMAGING | Pathogenic | 0,03 | Gort L et al, 2006 [ |
| Exon 6 | c.563A > G | missense | Q188R | DAMAGING | DAMAGING | Pathogenic | 0,22 | Reichardt JK et al., 1992 [ |
| Exon 7 | c.610C > T | nonsense | R204X | --- | --- | Pathogenic | 0,03 | Tyfield L et al., 1999 [ |
| Exon 8 | c.692G > A | missense | R231H | DAMAGING | DAMAGING | Pathogenic | 0,01 | Ashino J et al., 1995 [ |
| Exon 9 | c.824delT | deletion | L275Qfs*5 | --- | --- | Pathogenic | 0,01 | Elsas LJ et al., 1998 [ |
| Exon 9 | c.855G > T | missense | K285N | DAMAGING | DAMAGING | Pathogenic | 0,03 | Leslie ND et al., 1992 [ |
| Exon 9 | c.876G > A | silent | T292T | TOLERATED | TOLERATED | Translationally silent | 0,03 | Calderon FR et al., 2007 [ |
| Exon 9 | c.879C > T | silent | S293S | TOLERATED | TOLERATED | Translationally silent | 0,01 | Calderon FR et al., 2007 [ |
| Exon 10 | c.940A > G* | missense | N314D | TOLERATED | TOLERATED | Benign (Duarte 1 and 2) | 0,08 | Reichardt JK et al., 1991 [ |
| Exon 10 | c.945 T > C | silent | H315H | TOLERATED | TOLERATED | Translationally silent | 0,03 | Lai K et al., 1996 [ |
| Exon 10 | c.974C > T | missense | P325L | DAMAGING | DAMAGING | Pathogenic | 0,01 | Greber-Platzer S et al., 199 [ |
*these mutations are found in cis in Duarte 2 allele
#
@
New mutations are indicated in bold
Fig. 1Electropherograms of the novel GALT mutations identified in this study
Fig. 2Electropherograms of the GALK1 mutations identified in the patient with galactosemia type II