Literature DB >> 27173804

Plantago lagopus B Chromosome Is Enriched in 5S rDNA-Derived Satellite DNA.

Katrin Kumke1, Jiří Macas, Jörg Fuchs, Lothar Altschmied, Jasmeet Kour, Manoj K Dhar, Andreas Houben.   

Abstract

B chromosomes are supernumerary dispensable parts of the karyotype which appear in some individuals of some populations in some species. Using advanced sequencing technology, we in silico characterized the high-copy DNA composition of Plantago lagopus with and without B chromosomes. The nuclear genome (2.46 pg/2C) was found to be relatively rich in repetitive sequences, with highly and moderately repeated elements making up 68% of the genome. Besides a centromere-specific marker, we identified a B-specific satellite and a repeat enriched in polymorphic A chromosome segments. The B-specific tandem repeat PLsatB originated from sequence amplification including 5S rDNA fragments.
© 2016 S. Karger AG, Basel.

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Year:  2016        PMID: 27173804     DOI: 10.1159/000444873

Source DB:  PubMed          Journal:  Cytogenet Genome Res        ISSN: 1424-8581            Impact factor:   1.636


  12 in total

1.  Out of patterns, the euchromatic B chromosome of the grasshopper Abracris flavolineata is not enriched in high-copy repeats.

Authors:  Diogo Milani; Francisco J Ruiz-Ruano; Juan Pedro M Camacho; Diogo C Cabral-de-Mello
Journal:  Heredity (Edinb)       Date:  2021-09-04       Impact factor: 3.821

2.  B chromosome in Plantago lagopus Linnaeus, 1753 shows preferential transmission and accumulation through unusual processes.

Authors:  Manoj K Dhar; Gurmeet Kour; Sanjana Kaul
Journal:  Comp Cytogenet       Date:  2017-05-22       Impact factor: 1.800

Review 3.  How Next-Generation Sequencing Has Aided Our Understanding of the Sequence Composition and Origin of B Chromosomes.

Authors:  Alevtina Ruban; Thomas Schmutzer; Uwe Scholz; Andreas Houben
Journal:  Genes (Basel)       Date:  2017-10-25       Impact factor: 4.096

4.  Higher-order organisation of extremely amplified, potentially functional and massively methylated 5S rDNA in European pikes (Esox sp.).

Authors:  Radka Symonová; Konrad Ocalewicz; Lech Kirtiklis; Giovanni Battista Delmastro; Šárka Pelikánová; Sonia Garcia; Aleš Kovařík
Journal:  BMC Genomics       Date:  2017-05-18       Impact factor: 3.969

Review 5.  Origin, Behaviour, and Transmission of B Chromosome with Special Reference to Plantago lagopus.

Authors:  Manoj K Dhar; Jasmeet Kour; Sanjana Kaul
Journal:  Genes (Basel)       Date:  2019-02-18       Impact factor: 4.096

6.  The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata.

Authors:  Diogo Milani; Érica Ramos; Vilma Loreto; Dardo Andrea Martí; Adauto Lima Cardoso; Karen Cristiane Martinez de Moraes; Cesar Martins; Diogo Cavalcanti Cabral-de-Mello
Journal:  BMC Genet       Date:  2017-08-29       Impact factor: 2.797

7.  Cestrum strigilatum (Ruiz & Pavón, 1799) B chromosome shares repetitive DNA sequences with A chromosomes of different Cestrum (Linnaeus, 1753) species.

Authors:  André Luís Laforga Vanzela; Adriano Alves de Paula; Carolina Cristina Quintas; Thiago Fernandes; Joana Neres da Cruz Baldissera; Thaíssa Boldieri de Souza
Journal:  Comp Cytogenet       Date:  2017-08-03       Impact factor: 1.800

8.  Satellite DNAs Unveil Clues about the Ancestry and Composition of B Chromosomes in Three Grasshopper Species.

Authors:  Diogo Milani; Vanessa B Bardella; Ana B S M Ferretti; Octavio M Palacios-Gimenez; Adriana de S Melo; Rita C Moura; Vilma Loreto; Hojun Song; Diogo C Cabral-de-Mello
Journal:  Genes (Basel)       Date:  2018-10-26       Impact factor: 4.096

Review 9.  Evolution of Plant B Chromosome Enriched Sequences.

Authors:  André Marques; Sonja Klemme; Andreas Houben
Journal:  Genes (Basel)       Date:  2018-10-22       Impact factor: 4.096

10.  Repetitive DNA landscape in essential A and supernumerary B chromosomes of Festuca pratensis Huds.

Authors:  Rahman Ebrahimzadegan; Andreas Houben; Ghader Mirzaghaderi
Journal:  Sci Rep       Date:  2019-12-27       Impact factor: 4.379

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