Literature DB >> 27170366

Starch-degrading polysaccharide monooxygenases.

Van V Vu1, Michael A Marletta2.   

Abstract

Polysaccharide degradation by hydrolytic enzymes glycoside hydrolases (GHs) is well known. More recently, polysaccharide monooxygenases (PMOs, also known as lytic PMOs or LPMOs) were found to oxidatively degrade various polysaccharides via a copper-dependent hydroxylation. PMOs were previously thought to be either GHs or carbohydrate binding modules (CBMs), and have been re-classified in carbohydrate active enzymes (CAZY) database as auxiliary activity (AA) families. These enzymes include cellulose-active fungal PMOs (AA9, formerly GH61), chitin- and cellulose-active bacterial PMOs (AA10, formerly CBM33), and chitin-active fungal PMOs (AA11). These PMOs significantly boost the activity of GHs under industrially relevant conditions, and thus have great potential in the biomass-based biofuel industry. PMOs that act on starch are the latest PMOs discovered (AA13), which has expanded our perspectives in PMOs studies and starch degradation. Starch-active PMOs have many common structural features and biochemical properties of the PMO superfamily, yet differ from other PMO families in several important aspects. These differences likely correlate, at least in part, to the differences in primary and higher order structures of starch and cellulose, and chitin. In this review we will discuss the discovery, structural features, biochemical and biophysical properties, and possible biological functions of starch-active PMOs, as well as their potential application in the biofuel, food, and other starch-based industries. Important questions regarding various aspects of starch-active PMOs and possible economical driving force for their future studies will also be highlighted.

Entities:  

Keywords:  Auxiliary activity family 13; Biofuels; Copper enzymes; Plant pathogens; Polysaccharide monooxygenases; Starch degradation

Mesh:

Substances:

Year:  2016        PMID: 27170366     DOI: 10.1007/s00018-016-2251-9

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  34 in total

1.  Oligosaccharide dehydrogenase-modified graphite electrodes for the amperometric determination of sugars in a flow injection system.

Authors:  M Tessema; E Csöregi; T Ruzgas; G Kenausis; T Solomon; L Gorton
Journal:  Anal Chem       Date:  1997-10-01       Impact factor: 6.986

2.  Cellobiose dehydrogenase and a copper-dependent polysaccharide monooxygenase potentiate cellulose degradation by Neurospora crassa.

Authors:  Christopher M Phillips; William T Beeson; Jamie H Cate; Michael A Marletta
Journal:  ACS Chem Biol       Date:  2011-10-25       Impact factor: 5.100

Review 3.  Glucoamylases: structural and biotechnological aspects.

Authors:  Julia Marín-Navarro; Julio Polaina
Journal:  Appl Microbiol Biotechnol       Date:  2010-12-09       Impact factor: 4.813

4.  Determinants of regioselective hydroxylation in the fungal polysaccharide monooxygenases.

Authors:  Van V Vu; William T Beeson; Christopher M Phillips; Jamie H D Cate; Michael A Marletta
Journal:  J Am Chem Soc       Date:  2013-12-26       Impact factor: 15.419

5.  Oxidative cleavage of cellulose by fungal copper-dependent polysaccharide monooxygenases.

Authors:  William T Beeson; Christopher M Phillips; Jamie H D Cate; Michael A Marletta
Journal:  J Am Chem Soc       Date:  2011-12-28       Impact factor: 15.419

6.  Discovery of LPMO activity on hemicelluloses shows the importance of oxidative processes in plant cell wall degradation.

Authors:  Jane W Agger; Trine Isaksen; Anikó Várnai; Silvia Vidal-Melgosa; William G T Willats; Roland Ludwig; Svein J Horn; Vincent G H Eijsink; Bjørge Westereng
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-14       Impact factor: 11.205

Review 7.  The Top 10 fungal pathogens in molecular plant pathology.

Authors:  Ralph Dean; Jan A L Van Kan; Zacharias A Pretorius; Kim E Hammond-Kosack; Antonio Di Pietro; Pietro D Spanu; Jason J Rudd; Marty Dickman; Regine Kahmann; Jeff Ellis; Gary D Foster
Journal:  Mol Plant Pathol       Date:  2012-05       Impact factor: 5.663

Review 8.  Lytic Polysaccharide Monooxygenases in Biomass Conversion.

Authors:  Glyn R Hemsworth; Esther M Johnston; Gideon J Davies; Paul H Walton
Journal:  Trends Biotechnol       Date:  2015-10-21       Impact factor: 19.536

9.  Discovery of the combined oxidative cleavage of plant xylan and cellulose by a new fungal polysaccharide monooxygenase.

Authors:  Matthias Frommhagen; Stefano Sforza; Adrie H Westphal; Jaap Visser; Sandra W A Hinz; Martijn J Koetsier; Willem J H van Berkel; Harry Gruppen; Mirjam A Kabel
Journal:  Biotechnol Biofuels       Date:  2015-07-17       Impact factor: 6.040

10.  Structure and boosting activity of a starch-degrading lytic polysaccharide monooxygenase.

Authors:  Leila Lo Leggio; Thomas J Simmons; Jens-Christian N Poulsen; Kristian E H Frandsen; Glyn R Hemsworth; Mary A Stringer; Pernille von Freiesleben; Morten Tovborg; Katja S Johansen; Leonardo De Maria; Paul V Harris; Chee-Leong Soong; Paul Dupree; Theodora Tryfona; Nicolas Lenfant; Bernard Henrissat; Gideon J Davies; Paul H Walton
Journal:  Nat Commun       Date:  2015-01-22       Impact factor: 14.919

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  13 in total

1.  Substrate selectivity in starch polysaccharide monooxygenases.

Authors:  Van V Vu; John A Hangasky; Tyler C Detomasi; Skylar J W Henry; Son Tung Ngo; Elise A Span; Michael A Marletta
Journal:  J Biol Chem       Date:  2019-06-24       Impact factor: 5.157

Review 2.  Remarkable evolutionary relatedness among the enzymes and proteins from the α-amylase family.

Authors:  Štefan Janeček; Marek Gabriško
Journal:  Cell Mol Life Sci       Date:  2016-05-06       Impact factor: 9.261

3.  AA15 lytic polysaccharide monooxygenase is required for efficient chitinous cuticle turnover during insect molting.

Authors:  Mingbo Qu; Myeongjin Kim; Xiaoxi Guo; Shuang Tian; Qing Yang; Seulgi Mun; Mi Young Noh; Karl J Kramer; Subbaratnam Muthukrishnan; Yasuyuki Arakane
Journal:  Commun Biol       Date:  2022-05-31

Review 4.  Oxygen Activation by Cu LPMOs in Recalcitrant Carbohydrate Polysaccharide Conversion to Monomer Sugars.

Authors:  Katlyn K Meier; Stephen M Jones; Thijs Kaper; Henrik Hansson; Martijn J Koetsier; Saeid Karkehabadi; Edward I Solomon; Mats Sandgren; Bradley Kelemen
Journal:  Chem Rev       Date:  2017-11-20       Impact factor: 60.622

5.  PCuAC domains from methane-oxidizing bacteria use a histidine brace to bind copper.

Authors:  Oriana S Fisher; Madison R Sendzik; Matthew O Ross; Thomas J Lawton; Brian M Hoffman; Amy C Rosenzweig
Journal:  J Biol Chem       Date:  2019-09-16       Impact factor: 5.157

Review 6.  Lytic polysaccharide monooxygenases: a crystallographer's view on a new class of biomass-degrading enzymes.

Authors:  Kristian E H Frandsen; Leila Lo Leggio
Journal:  IUCrJ       Date:  2016-10-14       Impact factor: 4.769

7.  Fungal Hybrid B heme peroxidases - unique fusions of a heme peroxidase domain with a carbohydrate-binding domain.

Authors:  Marcel Zámocký; Štefan Janeček; Christian Obinger
Journal:  Sci Rep       Date:  2017-08-24       Impact factor: 4.379

8.  Lytic polysaccharide monooxygenases and other oxidative enzymes are abundantly secreted by Aspergillus nidulans grown on different starches.

Authors:  Laura Nekiunaite; Magnus Ø Arntzen; Birte Svensson; Gustav Vaaje-Kolstad; Maher Abou Hachem
Journal:  Biotechnol Biofuels       Date:  2016-09-01       Impact factor: 6.040

9.  AA16, a new lytic polysaccharide monooxygenase family identified in fungal secretomes.

Authors:  Camille Filiatrault-Chastel; David Navarro; Mireille Haon; Sacha Grisel; Isabelle Herpoël-Gimbert; Didier Chevret; Mathieu Fanuel; Bernard Henrissat; Senta Heiss-Blanquet; Antoine Margeot; Jean-Guy Berrin
Journal:  Biotechnol Biofuels       Date:  2019-03-16       Impact factor: 6.040

10.  Genome-wide annotation, comparison and functional genomics of carbohydrate-active enzymes in legumes infecting Fusarium oxysporum formae speciales.

Authors:  Abhijeet Roy; Aiswarya Jayaprakash; Raja Rajeswary T; A Annamalai; Ptv Lakshmi
Journal:  Mycology       Date:  2020-01-04
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