Literature DB >> 27167073

Clinical application of next-generation sequencing in preimplantation genetic diagnosis cycles for Robertsonian and reciprocal translocations.

Wenke Zhang1,2, Ying Liu3, Li Wang1,4, Hui Wang1, Minyue Ma1, Mengnan Xu5, Xiaofei Xu1, ZhiYing Gao1, Jinliang Duan3, David S Cram6, Yuanqing Yao7.   

Abstract

PURPOSE: The purpose of this study was to apply next-generation sequencing (NGS) technology to identify chromosomally normal embryos for transfer in preimplantation genetic diagnosis (PGD) cycles for translocations.
METHODS: A total of 21 translocation couples with a history of infertility and repeated miscarriage presented at our PGD clinic for 24-chromosome embryo testing using copy number variation sequencing (CNV-Seq).
RESULTS: Testing of 98 embryo samples identified 68 aneuploid (69.4 %) and 30 (30.6 %) euploid embryos. Among the aneuploid embryos, the most common abnormalities were segmental translocation imbalances, followed by whole autosomal trisomies and monosomies, segmental imbalances of non-translocation chromosomes, and mosaicism. In all unbalanced embryos resulting from reciprocal translocations, CNV-Seq precisely identified both segmental imbalances, extending from the predicted breakpoints to the chromosome termini. From the 21 PGD cycles, eight patients had all abnormal embryos and 13 patients had at least one normal/balanced and euploid embryo available for transfer. In nine intrauterine transfer cycles, seven healthy babies have been born. In four of the seven children tested at 18 weeks gestation, the karyotypes matched with the original PGD results.
CONCLUSION: In clinical PGD translocation cycles, CNV-Seq displayed the hallmarks of a comprehensive diagnostic technology for high-resolution 24-chromosome testing of embryos, capable of identifying true euploid embryos for transfer.

Entities:  

Keywords:  Aneuploidy; Copy number variation; Next-generation sequencing; Preimplantation genetic diagnosis; Whole genome amplification

Mesh:

Year:  2016        PMID: 27167073      PMCID: PMC4930785          DOI: 10.1007/s10815-016-0724-2

Source DB:  PubMed          Journal:  J Assist Reprod Genet        ISSN: 1058-0468            Impact factor:   3.412


  32 in total

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Authors:  Robert Tibshirani; Pei Wang
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Authors:  Alan H Handyside
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3.  The Performance of Whole Genome Amplification Methods and Next-Generation Sequencing for Pre-Implantation Genetic Diagnosis of Chromosomal Abnormalities.

Authors:  Na Li; Li Wang; Hui Wang; Minyue Ma; Xiaohong Wang; Yi Li; Wenke Zhang; Jianguang Zhang; David S Cram; Yuanqing Yao
Journal:  J Genet Genomics       Date:  2015-03-14       Impact factor: 4.275

4.  Non-invasive prenatal testing of fetal whole chromosome aneuploidy by massively parallel sequencing.

Authors:  Desheng Liang; Weigang Lv; Hua Wang; Liangpu Xu; Jing Liu; Haoxian Li; Liang Hu; Ying Peng; Lingqian Wu
Journal:  Prenat Diagn       Date:  2013-01-09       Impact factor: 3.050

5.  Validation of multiple annealing and looping-based amplification cycle sequencing for 24-chromosome aneuploidy screening of cleavage-stage embryos.

Authors:  Jin Huang; Liying Yan; Wei Fan; Nan Zhao; Yan Zhang; Fuchou Tang; X Sunney Xie; Jie Qiao
Journal:  Fertil Steril       Date:  2014-09-17       Impact factor: 7.329

6.  Outcome of preimplantation genetic diagnosis of translocations.

Authors:  S Munné; M Sandalinas; T Escudero; J Fung; L Gianaroli; J Cohen
Journal:  Fertil Steril       Date:  2000-06       Impact factor: 7.329

Review 7.  Genetic factors as a cause of miscarriage.

Authors:  N Suzumori; M Sugiura-Ogasawara
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8.  Maternal mosaicism is a significant contributor to discordant sex chromosomal aneuploidies associated with noninvasive prenatal testing.

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9.  Clinical outcome of preimplantation genetic diagnosis and screening using next generation sequencing.

Authors:  Yueqiu Tan; Xuyang Yin; Shuoping Zhang; Hui Jiang; Ke Tan; Jian Li; Bo Xiong; Fei Gong; Chunlei Zhang; Xiaoyu Pan; Fang Chen; Shengpei Chen; Chun Gong; Changfu Lu; Keli Luo; Yifan Gu; Xiuqing Zhang; Wei Wang; Xun Xu; Gábor Vajta; Lars Bolund; Huanming Yang; Guangxiu Lu; Yutao Du; Ge Lin
Journal:  Gigascience       Date:  2014-12-04       Impact factor: 6.524

10.  Preimplantation genetic diagnosis for aneuploidy and translocations using array comparative genomic hybridization.

Authors:  Santiago Munné
Journal:  Curr Genomics       Date:  2012-09       Impact factor: 2.236

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  17 in total

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2.  Analysis of balanced reciprocal translocations in patients with subfertility using single-molecule optical mapping.

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Journal:  J Assist Reprod Genet       Date:  2020-02-05       Impact factor: 3.412

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4.  Next Generation Sequencing (NGS) in chromosome translocation 46, XX, t (9; X) (q22; q28) - a case report.

Authors:  Monise Santos; Ivan Henrique Yoshida; Caroline Zulim; Michelli Suemi Tanada; Emerson Barchi Cordts; Caio Parente Barbosa
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5.  Logistic regression analyses of factors affecting the euploidy of blastocysts undergoing in vitro fertilization and preimplantation genetic testing.

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6.  A mathematical model for predicting the number of transferable blastocysts in next-generation sequencing-based preimplantation genetic testing.

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7.  Evaluation of comprehensive chromosome screening platforms for the detection of mosaic segmental aneuploidy.

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8.  Systematic assessment of the performance of whole-genome amplification for SNP/CNV detection and β-thalassemia genotyping.

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Journal:  J Hum Genet       Date:  2018-02-13       Impact factor: 3.172

9.  Third-generation sequencing: any future opportunities for PGT?

Authors:  Sai Liu; Hui Wang; Don Leigh; David S Cram; Li Wang; Yuanqing Yao
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10.  In vitro fertilization outcomes after preimplantation genetic testing for chromosomal structural rearrangements comparing fluorescence in-situ hybridization, microarray comparative genomic hybridization, and next-generation sequencing.

Authors:  Chantal B Bartels; Reeva Makhijani; Prachi Godiwala; Alison Bartolucci; John C Nulsen; Daniel R Grow; Lawrence Engmann; Claudio A Benadiva
Journal:  F S Rep       Date:  2020-09-25
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