Literature DB >> 27153372

Tracking Transitions in Spider Wrapping Silk Conformation and Dynamics by (19)F Nuclear Magnetic Resonance Spectroscopy.

Muzaddid Sarker1, Kathleen E Orrell1, Lingling Xu1, Marie-Laurence Tremblay1, Jessi J Bak1, Xiang-Qin Liu1, Jan K Rainey1.   

Abstract

Aciniform silk protein (AcSp1) is the primary component of wrapping silk, the toughest of the spider silks because of a combination of high tensile strength and extensibility. Argiope trifasciata AcSp1 contains a core repetitive domain with at least 14 homogeneous 200-amino acid units ("W" units). Upon fibrillogenesis, AcSp1 converts from an α-helix-rich soluble state to a mixed α-helical/β-sheet conformation. Solution-state nuclear magnetic resonance (NMR) spectroscopy allowed demonstration of variable local stability within the W unit, but comprehensive characterization was confounded by spectral overlap, which was exacerbated by decreased chemical shift dispersion upon denaturation. Here, (19)F NMR spectroscopy, in the context of a single W unit (W1), is applied to track changes in structure and dynamics. Four strategic positions in the W unit were mutated to tryptophan and biosynthetically labeled with 5-fluorotryptophan (5F-Trp). Simulated annealing-based structure calculations implied that these substitutions should be tolerated, while circular dichroism (CD) spectroscopy and (1)H-(15)N chemical shift displacements indicated minimal structural perturbation in W1 mutants. Fiber formation by W2 concatemers containing 5F-Trp substitutions in both W units demonstrated retention of functionality, a somewhat surprising finding in light of sequence conservation between species. Each 5F-Trp-labeled W1 exhibited a unique (19)F chemical shift, line width, longitudinal relaxation time constant (T1), and solvent isotope shift. Perturbation to (19)F chemical shift and nuclear spin relaxation parameters reflected changes in the conformation and dynamics at each 5F-Trp site upon addition of urea and dodecylphosphocholine (DPC). (19)F NMR spectroscopy allowed unambiguous localized tracking throughout titration with each perturbant, demonstrating distinct behavior for each perturbant not previously revealed by heteronuclear NMR experiments.

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Year:  2016        PMID: 27153372      PMCID: PMC5770200          DOI: 10.1021/acs.biochem.6b00429

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  35 in total

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Authors:  Ferenc Evanics; Irina Bezsonova; Joseph Marsh; Julianne L Kitevski; Julie D Forman-Kay; R Scott Prosser
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6.  Antibiotic-Releasing Silk Biomaterials for Infection Prevention and Treatment.

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7.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
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8.  Artificial skin--culturing of different skin cell lines for generating an artificial skin substitute on cross-weaved spider silk fibres.

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9.  Spider wrapping silk fibre architecture arising from its modular soluble protein precursor.

Authors:  Marie-Laurence Tremblay; Lingling Xu; Thierry Lefèvre; Muzaddid Sarker; Kathleen E Orrell; Jérémie Leclerc; Qing Meng; Michel Pézolet; Michèle Auger; Xiang-Qin Liu; Jan K Rainey
Journal:  Sci Rep       Date:  2015-06-26       Impact factor: 4.379

10.  Intragenic homogenization and multiple copies of prey-wrapping silk genes in Argiope garden spiders.

Authors:  R Crystal Chaw; Yonghui Zhao; Jie Wei; Nadia A Ayoub; Ryan Allen; Kirmanj Atrushi; Cheryl Y Hayashi
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  4 in total

1.  Identification of Wet-Spinning and Post-Spin Stretching Methods Amenable to Recombinant Spider Aciniform Silk.

Authors:  Nathan Weatherbee-Martin; Lingling Xu; Andre Hupe; Laurent Kreplak; Douglas S Fudge; Xiang-Qin Liu; Jan K Rainey
Journal:  Biomacromolecules       Date:  2016-07-20       Impact factor: 6.988

2.  Fluorotryptophan Incorporation Modulates the Structure and Stability of Transthyretin in a Site-Specific Manner.

Authors:  Xun Sun; H Jane Dyson; Peter E Wright
Journal:  Biochemistry       Date:  2017-09-28       Impact factor: 3.162

3.  Characterizing Aciniform Silk Repetitive Domain Backbone Dynamics and Hydrodynamic Modularity.

Authors:  Marie-Laurence Tremblay; Lingling Xu; Muzaddid Sarker; Xiang-Qin Liu; Jan K Rainey
Journal:  Int J Mol Sci       Date:  2016-08-10       Impact factor: 5.923

4.  Observing enzyme ternary transition state analogue complexes by 19F NMR spectroscopy.

Authors:  Anna Ampaw; Madison Carroll; Jill von Velsen; Debabrata Bhattasali; Alejandro Cohen; Matthew W Bowler; David L Jakeman
Journal:  Chem Sci       Date:  2017-10-23       Impact factor: 9.825

  4 in total

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