Literature DB >> 27152667

Can Changes in Temperature or Ionic Conditions Modify the DNA Organization in the Full Bacteriophage Capsid?

Marta de Frutos1, Amélie Leforestier1, Jéril Degrouard1, Nebraska Zambrano1, Frank Wien2, Pascale Boulanger3, Sandrine Brasilès3, Madalena Renouard3, Dominique Durand3, Françoise Livolant1.   

Abstract

We compared four bacteriophage species, T5, λ, T7, and Φ29, to explore the possibilities of DNA reorganization in the capsid where the chain is highly concentrated and confined. First, we did not detect any change in DNA organization as a function of temperature between 20 to 40 °C. Second, the presence of spermine (4+) induces a significant enlargement of the typical size of the hexagonal domains in all phages. We interpret these changes as a reorganization of DNA by slight movements of defects in the structure, triggered by a partial screening of repulsive interactions. We did not detect any signal characteristic of a long-range chiral organization of the encapsidated DNA in the presence and in the absence of spermine.

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Year:  2016        PMID: 27152667     DOI: 10.1021/acs.jpcb.6b01783

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  5 in total

1.  Experimental comparison of forces resisting viral DNA packaging and driving DNA ejection.

Authors:  Nicholas Keller; Zachary T Berndsen; Paul J Jardine; Douglas E Smith
Journal:  Phys Rev E       Date:  2017-05-17       Impact factor: 2.529

2.  Local structure of DNA toroids reveals curvature-dependent intermolecular forces.

Authors:  Luca Barberi; Françoise Livolant; Amélie Leforestier; Martin Lenz
Journal:  Nucleic Acids Res       Date:  2021-04-19       Impact factor: 16.971

3.  Influence of Microscopic Interactions on the Flexible Mechanical Properties of Viral DNA.

Authors:  Cheng-Yin Zhang; Neng-Hui Zhang
Journal:  Biophys J       Date:  2018-08-04       Impact factor: 4.033

4.  Effects of Model Shape, Volume, and Softness of the Capsid for DNA Packaging of phi29.

Authors:  Cecilia Bores; Michael Woodson; Marc C Morais; B Montgomery Pettitt
Journal:  J Phys Chem B       Date:  2020-11-05       Impact factor: 2.991

5.  The mobility of packaged phage genome controls ejection dynamics.

Authors:  Alex Evilevitch
Journal:  Elife       Date:  2018-09-04       Impact factor: 8.140

  5 in total

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