| Literature DB >> 27148074 |
Peng Li1, Chandan Karmakar2, Chang Yan1, Marimuthu Palaniswami3, Changchun Liu1.
Abstract
Epilepsy is an electrophysiological disorder of the brain, the hallmark of which is recurrent and unprovoked seizures. Electroencephalogram (EEG) measures electrical activity of the brain that is commonly applied as a non-invasive technique for seizure detection. Although a vast number of publications have been published on intelligent algorithms to classify interictal and ictal EEG, it remains an open question whether they can be detected using short-length EEG recordings. In this study, we proposed three protocols to select 5 s EEG segment for classifying interictal and ictal EEG from normal. We used the publicly-accessible Bonn database, which consists of normal, interical, and ictal EEG signals with a length of 4097 sampling points (23.6 s) per record. In this study, we selected three segments of 868 points (5 s) length from each recordings and evaluated results for each of them separately. The well-studied irregularity measure-sample entropy (SampEn)-and a more recently proposed complexity measure-distribution entropy (DistEn)-were used as classification features. A total of 20 combinations of input parameters m and τ for the calculation of SampEn and DistEn were selected for compatibility. Results showed that SampEn was undefined for half of the used combinations of input parameters and indicated a large intra-class variance. Moreover, DistEn performed robustly for short-length EEG data indicating relative independence from input parameters and small intra-class fluctuations. In addition, it showed acceptable performance for all three classification problems (interictal EEG from normal, ictal EEG from normal, and ictal EEG from interictal) compared to SampEn, which showed better results only for distinguishing normal EEG from interictal and ictal. Both SampEn and DistEn showed good reproducibility and consistency, as evidenced by the independence of results on analysing protocol.Entities:
Keywords: distribution entropy (DistEn); electroencephalogram (EEG); epileptic seizure; sample entropy (SampEn); short-length EEG analysis
Year: 2016 PMID: 27148074 PMCID: PMC4830849 DOI: 10.3389/fphys.2016.00136
Source DB: PubMed Journal: Front Physiol ISSN: 1664-042X Impact factor: 4.566
Figure 1Overall block diagram summarizing steps of this study.
Figure 2Schematic diagram of the three 5 s segment selection protocols.
DistEn of normal, interictal, and ictal EEG recordings.
| 1 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.05 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.90 ± 0.03 | 0.85 ± 0.03 | 0.86 ± 0.04 | 0.89 ± 0.05 |
| 2 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.05 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.90 ± 0.03 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 3 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.05 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.03 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 4 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.90 ± 0.05 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.03 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.88 ± 0.05 |
| 5 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.90 ± 0.05 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.03 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.88 ± 0.05 |
| 6 | 0.85 ± 0.02 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 7 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.02 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 8 | 0.85 ± 0.02 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 9 | 0.85 ± 0.02 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 10 | 0.85 ± 0.02 | 0.87 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 11 | 0.85 ± 0.02 | 0.87 ± 0.03 | 0.90 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 12 | 0.85 ± 0.02 | 0.87 ± 0.03 | 0.90 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 13 | 0.85 ± 0.02 | 0.87 ± 0.03 | 0.90 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.02 | 0.90 ± 0.04 | 0.85 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 14 | 0.85 ± 0.02 | 0.87 ± 0.03 | 0.90 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 15 | 0.85 ± 0.02 | 0.87 ± 0.03 | 0.90 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.90 ± 0.04 | 0.85 ± 0.03 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 16 | 0.84 ± 0.02 | 0.87 ± 0.03 | 0.89 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.02 | 0.89 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 17 | 0.84 ± 0.02 | 0.87 ± 0.03 | 0.89 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.02 | 0.89 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 18 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.02 | 0.89 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.05 |
| 19 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.02 | 0.89 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.88 ± 0.05 |
| 20 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.89 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.02 | 0.89 ± 0.04 | 0.84 ± 0.02 | 0.86 ± 0.03 | 0.88 ± 0.05 |
Values are given in Median ± IQR (inter quartile range). Results corresponding to different analyzing protocols are listed in columns A, B, and C, respectively.
†: p < 0.001.
Interictal significantly different (p < 0.001) from Normal.
Ictal significantly different (p < 0.001) from Normal.
Ictal significantly different (p < 0.001) from Interictal. The p-values are indicated by Mann–Whitney U-test. Strings next to feature index indicate the significant levels for all three analyzing protocols, e.g., the string
indicates p < 0.001 for protocols A, B, and C. Feature index 1, 2, … , 20 indicate the [m, τ] combinations [2, 8], [2, 9], … .,[5, 12], respectively.
SampEn of normal, interictal, and ictal EEG recordings.
| 1 | 2.32 ± 0.18 | 1.92 ± 0.38 | 1.67 ± 0.49 | 2.29 ± 0.23 | 1.89 ± 0.39 | 1.76 ± 0.44 | 2.29 ± 0.21 | 1.89 ± 0.41 | 1.84 ± 0.58 |
| 2 | 2.34 ± 0.21 | 1.92 ± 0.38 | 1.72 ± 0.50 | 2.31 ± 0.18 | 1.90 ± 0.40 | 1.81 ± 0.48 | 2.30 ± 0.16 | 1.90 ± 0.47 | 1.83 ± 0.53 |
| 3 | 2.35 ± 0.17 | 1.94 ± 0.37 | 1.78 ± 0.47 | 2.31 ± 0.15 | 1.93 ± 0.38 | 1.82 ± 0.44 | 2.32 ± 0.15 | 1.94 ± 0.42 | 1.84 ± 0.46 |
| 4 | 2.34 ± 0.16 | 1.93 ± 0.37 | 1.81 ± 0.42 | 2.31 ± 0.16 | 1.91 ± 0.38 | 1.87 ± 0.41 | 2.32 ± 0.15 | 1.95 ± 0.44 | 1.89 ± 0.47 |
| 5 | 2.33 ± 0.17 | 1.92 ± 0.34 | 1.83 ± 0.41 | 2.32 ± 0.17 | 1.92 ± 0.37 | 1.88 ± 0.39 | 2.31 ± 0.17 | 1.93 ± 0.39 | 1.93 ± 0.48 |
| 6 | 2.16 ± 0.38 | 1.38 ± 0.50 | 1.43 ± 0.53 | 2.11 ± 0.38 | 1.33 ± 0.51 | 1.46 ± 0.42 | 2.10 ± 0.32 | 1.36 ± 0.54 | 1.50 ± 0.63 |
| 7 | 2.17 ± 0.38 | 1.35 ± 0.49 | 1.46 ± 0.53 | 2.11 ± 0.34 | 1.30 ± 0.48 | 1.45 ± 0.46 | 2.14 ± 0.36 | 1.38 ± 0.59 | 1.55 ± 0.58 |
| 8 | 2.15 ± 0.35 | 1.33 ± 0.48 | 1.50 ± 0.48 | 2.16 ± 0.34 | 1.32 ± 0.55 | 1.54 ± 0.43 | 2.13 ± 0.35 | 1.38 ± 0.52 | 1.52 ± 0.57 |
| 9 | 2.20 ± 0.34 | 1.29 ± 0.48 | 1.54 ± 0.51 | 2.12 ± 0.34 | 1.32 ± 0.45 | 1.56 ± 0.42 | 2.12 ± 0.34 | 1.34 ± 0.52 | 1.56 ± 0.61 |
| 10 | 2.18 ± 0.35 | 1.31 ± 0.52 | 1.55 ± 0.54 | 2.16 ± 0.34 | 1.29 ± 0.47 | 1.57 ± 0.35 | 2.18 ± 0.33 | 1.34 ± 0.57 | 1.60 ± 0.57 |
| 11~20 | Undefined | Undefined | Undefined | Undefined | Undefined | Undefined | Undefined | Undefined | Undefined |
Values are given in Median ± IQR (inter quartile range). Results corresponding to different analyzing protocols are listed in columns A, B, and C, respectively.
† p < 0.001.
Interictal significantly different (p < 0.001) from Normal.
Ictal significantly different (p < 0.001) from Normal.
cIctal significantly different (p < 0.001) from Interictal. The p-values are indicated by Mann–Whitney U-test. Strings next to feature index indicate the significant levels for all three analyzing protocols, e.g., the string
indicates p < 0.001 for protocols A, B, and C. Feature index 1, 2, … , 20 indicate the [m, τ] combinations [2, 8], [2, 9], … ., [5, 12], respectively.
Figure 3Area under the ROC curves (AUC) of three different protocols (see Supplementary Figures . Bars show AUC of ROC curves with feature indices from 1 to 20. Error bars show the average and standard deviation of the corresponding AUC sets (undefined values excluded).
Average and maximum Area under the ROC curves (AUC) values of DistEn and SampEn for different classification problems under different analyzing protocols.
| A | DistEn | 0.71 | 0.78 | 0.90 | 0.92 | 0.80 | 0.82 |
| SampEn | 0.95 | 0.95 | - | - | |||
| B | DistEn | 0.71 | 0.76 | 0.90 | 0.91 | 0.82 | |
| SampEn | 0.93 | 0.96 | 0.95 | - | - | ||
| C | DistEn | 0.66 | 0.70 | 0.85 | 0.87 | 0.76 | 0.78 |
| SampEn | 0.93 | 0.95 | 0.93 | 0.95 | - | - | |
Bold indicates the maximum AUC for each of the three classification problems.