Literature DB >> 27136319

Molecular Motors: Power Strokes Outperform Brownian Ratchets.

Jason A Wagoner1, Ken A Dill2.   

Abstract

Molecular motors convert chemical energy (typically from ATP hydrolysis) to directed motion and mechanical work. Their actions are often described in terms of "Power Stroke" (PS) and "Brownian Ratchet" (BR) mechanisms. Here, we use a transition-state model and stochastic thermodynamics to describe a range of mechanisms ranging from PS to BR. We incorporate this model into Hill's diagrammatic method to develop a comprehensive model of motor processivity that is simple but sufficiently general to capture the full range of behavior observed for molecular motors. We demonstrate that, under all conditions, PS motors are faster, more powerful, and more efficient at constant velocity than BR motors. We show that these differences are very large for simple motors but become inconsequential for complex motors with additional kinetic barrier steps.

Entities:  

Year:  2016        PMID: 27136319     DOI: 10.1021/acs.jpcb.6b02776

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  13 in total

1.  Mechanisms for achieving high speed and efficiency in biomolecular machines.

Authors:  Jason A Wagoner; Ken A Dill
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-08       Impact factor: 11.205

Review 2.  The Mechanisms of Substrate Selection, Catalysis, and Translocation by the Elongating RNA Polymerase.

Authors:  Georgiy A Belogurov; Irina Artsimovitch
Journal:  J Mol Biol       Date:  2019-05-31       Impact factor: 5.469

3.  Simulating the dynamics of the mechanochemical cycle of myosin-V.

Authors:  Shayantani Mukherjee; Raphael Alhadeff; Arieh Warshel
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-13       Impact factor: 11.205

Review 4.  Conformational selection and induced fit as a useful framework for molecular motor mechanisms.

Authors:  Eric A Galburt; Eric J Tomko
Journal:  Biophys Chem       Date:  2017-02-03       Impact factor: 2.352

5.  Allostery and Kinetic Proofreading.

Authors:  Vahe Galstyan; Rob Phillips
Journal:  J Phys Chem B       Date:  2019-12-13       Impact factor: 2.991

6.  Allocating dissipation across a molecular machine cycle to maximize flux.

Authors:  Aidan I Brown; David A Sivak
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-03       Impact factor: 11.205

7.  How kinesin waits for ATP affects the nucleotide and load dependence of the stepping kinetics.

Authors:  Ryota Takaki; Mauro L Mugnai; Yonathan Goldtzvik; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-28       Impact factor: 11.205

8.  Motor guidance by long-range communication on the microtubule highway.

Authors:  Sithara S Wijeratne; Shane A Fiorenza; Alex E Neary; Radhika Subramanian; Meredith D Betterton
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-07       Impact factor: 12.779

9.  Structural basis for power stroke vs. Brownian ratchet mechanisms of motor proteins.

Authors:  Wonmuk Hwang; Martin Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-10       Impact factor: 11.205

10.  Evolution of mechanical cooperativity among myosin II motors.

Authors:  Jason A Wagoner; Ken A Dill
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-18       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.