Literature DB >> 27129718

Subcellular modulation of protein VlsE stability and folding kinetics.

Jonathan Tai1, Kapil Dave2, Vincent Hahn3, Irisbel Guzman4, Martin Gruebele2,5.   

Abstract

The interior of a cell interacts differently with proteins than a dilute buffer because of a wide variety of macromolecules, chaperones, and osmolytes that crowd and interact with polypeptide chains. We compare folding of fluorescent constructs of protein VlsE among three environments inside cells. The nucleus increases the stability of VlsE relative to the cytoplasm, but slows down folding kinetics. VlsE is also more stable in the endoplasmic reticulum, but unlike PGK, tends to aggregate there. Although fluorescent-tagged VlsE and PGK show opposite stability trends from in vitro to the cytoplasm, their trends from cytoplasm to nucleus are similar.
© 2016 Federation of European Biochemical Societies.

Keywords:  cellular compartments; folding kinetics; protein stability; quinary interaction

Mesh:

Substances:

Year:  2016        PMID: 27129718     DOI: 10.1002/1873-3468.12193

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  6 in total

1.  Physicochemical code for quinary protein interactions in Escherichia coli.

Authors:  Xin Mu; Seongil Choi; Lisa Lang; David Mowray; Nikolay V Dokholyan; Jens Danielsson; Mikael Oliveberg
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-23       Impact factor: 11.205

Review 2.  Toward an understanding of biochemical equilibria within living cells.

Authors:  Germán Rivas; Allen P Minton
Journal:  Biophys Rev       Date:  2017-12-12

3.  An in vitro mimic of in-cell solvation for protein folding studies.

Authors:  Caitlin M Davis; Jonathan Deutsch; Martin Gruebele
Journal:  Protein Sci       Date:  2020-02-06       Impact factor: 6.725

4.  Competition of individual domain folding with inter-domain interaction in WW domain engineered repeat proteins.

Authors:  Kapil Dave; Andrei G Gasic; Margaret S Cheung; M Gruebele
Journal:  Phys Chem Chem Phys       Date:  2019-11-13       Impact factor: 3.676

Review 5.  Protein folding and surface interaction phase diagrams in vitro and in cells.

Authors:  Martin Gruebele
Journal:  FEBS Lett       Date:  2021-03-27       Impact factor: 4.124

6.  Crowding in Cellular Environments at an Atomistic Level from Computer Simulations.

Authors:  Michael Feig; Isseki Yu; Po-Hung Wang; Grzegorz Nawrocki; Yuji Sugita
Journal:  J Phys Chem B       Date:  2017-07-12       Impact factor: 2.991

  6 in total

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