Literature DB >> 27127333

Whole Abdominal Wall Segmentation using Augmented Active Shape Models (AASM) with Multi-Atlas Label Fusion and Level Set.

Zhoubing Xu1, Rebeccah B Baucom2, Richard G Abramson3, Benjamin K Poulose2, Bennett A Landman4.   

Abstract

The abdominal wall is an important structure differentiating subcutaneous and visceral compartments and intimately involved with maintaining abdominal structure. Segmentation of the whole abdominal wall on routinely acquired computed tomography (CT) scans remains challenging due to variations and complexities of the wall and surrounding tissues. In this study, we propose a slice-wise augmented active shape model (AASM) approach to robustly segment both the outer and inner surfaces of the abdominal wall. Multi-atlas label fusion (MALF) and level set (LS) techniques are integrated into the traditional ASM framework. The AASM approach globally optimizes the landmark updates in the presence of complicated underlying local anatomical contexts. The proposed approach was validated on 184 axial slices of 20 CT scans. The Hausdorff distance against the manual segmentation was significantly reduced using proposed approach compared to that using ASM, MALF, and LS individually. Our segmentation of the whole abdominal wall enables the subcutaneous and visceral fat measurement, with high correlation to the measurement derived from manual segmentation. This study presents the first generic algorithm that combines ASM, MALF, and LS, and demonstrates practical application for automatically capturing visceral and subcutaneous fat volumes.

Entities:  

Keywords:  abdominal wall; active shape model; computed tomography; level set; multi-atlas label fusion

Year:  2016        PMID: 27127333      PMCID: PMC4845968          DOI: 10.1117/12.2216841

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  8 in total

1.  Evaluation of atlas selection strategies for atlas-based image segmentation with application to confocal microscopy images of bee brains.

Authors:  Torsten Rohlfing; Robert Brandt; Randolf Menzel; Calvin R Maurer
Journal:  Neuroimage       Date:  2004-04       Impact factor: 6.556

2.  Active contours without edges.

Authors:  T F Chan; L A Vese
Journal:  IEEE Trans Image Process       Date:  2001       Impact factor: 10.856

3.  Texture analysis improves level set segmentation of the anterior abdominal wall.

Authors:  Zhoubing Xu; Wade M Allen; Rebeccah B Baucom; Benjamin K Poulose; Bennett A Landman
Journal:  Med Phys       Date:  2013-12       Impact factor: 4.071

4.  Fast free-form deformation using graphics processing units.

Authors:  Marc Modat; Gerard R Ridgway; Zeike A Taylor; Manja Lehmann; Josephine Barnes; David J Hawkes; Nick C Fox; Sébastien Ourselin
Journal:  Comput Methods Programs Biomed       Date:  2009-10-08       Impact factor: 5.428

5.  Regression forests for efficient anatomy detection and localization in computed tomography scans.

Authors:  A Criminisi; D Robertson; E Konukoglu; J Shotton; S Pathak; S White; K Siddiqui
Journal:  Med Image Anal       Date:  2013-01-27       Impact factor: 8.545

6.  Association between visceral adiposity and colorectal polyps on CT colonography.

Authors:  Ronald M Summers; Jiamin Liu; Daniel L Sussman; Andrew J Dwyer; Bhavya Rehani; Perry J Pickhardt; J Richard Choi; Jianhua Yao
Journal:  AJR Am J Roentgenol       Date:  2012-07       Impact factor: 3.959

7.  Quantitative Anatomical Labeling of the Anterior Abdominal Wall.

Authors:  Wade M Allen; Zhoubing Xu; Andrew J Asman; Benjamin K Poulose; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2013-03-28

8.  Multi-Atlas Segmentation with Joint Label Fusion.

Authors:  Hongzhi Wang; Jung W Suh; Sandhitsu R Das; John B Pluta; Caryne Craige; Paul A Yushkevich
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2012-06-26       Impact factor: 6.226

  8 in total
  1 in total

1.  Abdomen and spinal cord segmentation with augmented active shape models.

Authors:  Zhoubing Xu; Benjamin N Conrad; Rebeccah B Baucom; Seth A Smith; Benjamin K Poulose; Bennett A Landman
Journal:  J Med Imaging (Bellingham)       Date:  2016-08-26
  1 in total

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